| Chain sequence(s) |
D: AHIVMVVDAYKKPT
input PDB |
| Selected Chain(s) | D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with D chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 111 | A | D | 0.0216 | |
| 112 | H | D | 0.5768 | |
| 113 | I | D | 2.6526 | |
| 114 | V | D | 3.2720 | |
| 115 | M | D | 2.7337 | |
| 116 | V | D | 2.0230 | |
| 117 | D | D | -0.3723 | |
| 118 | A | D | -0.0125 | |
| 119 | Y | D | 0.2238 | |
| 120 | K | D | -1.4168 | |
| 121 | P | D | -0.7847 | |
| 122 | T | D | -0.4015 |