| Chain sequence(s) |
A: MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9347 | |
| 2 | Q | A | 0.0797 | |
| 3 | V | A | 1.6167 | |
| 4 | S | A | 0.9493 | |
| 5 | T | A | 1.1371 | |
| 6 | A | A | 1.6244 | |
| 7 | A | A | 2.1797 | |
| 8 | L | A | 3.1255 | |
| 9 | A | A | 2.5661 | |
| 10 | V | A | 3.5710 | |
| 11 | L | A | 3.5802 | |
| 12 | L | A | 3.5853 | |
| 13 | C | A | 3.1979 | |
| 14 | T | A | 2.4047 | |
| 15 | M | A | 2.1000 | |
| 16 | A | A | 1.7502 | |
| 17 | L | A | 2.2715 | |
| 18 | C | A | 1.8505 | |
| 19 | N | A | 0.1658 | |
| 20 | Q | A | 0.3031 | |
| 21 | V | A | 2.0916 | |
| 22 | L | A | 2.0831 | |
| 23 | S | A | 0.6237 | |
| 24 | A | A | 0.6595 | |
| 25 | P | A | 0.6519 | |
| 26 | L | A | 1.1931 | |
| 27 | A | A | 0.1512 | |
| 28 | A | A | -0.4381 | |
| 29 | D | A | -1.4870 | |
| 30 | T | A | -0.7334 | |
| 31 | P | A | -0.7095 | |
| 32 | T | A | -0.5525 | |
| 33 | A | A | -0.1416 | |
| 34 | C | A | 0.0496 | |
| 35 | C | A | 0.0000 | |
| 36 | F | A | 1.7482 | |
| 37 | S | A | 0.8009 | |
| 38 | Y | A | 0.3041 | |
| 39 | T | A | -0.7059 | |
| 40 | S | A | -1.2960 | |
| 41 | R | A | -2.4572 | |
| 42 | Q | A | -2.4947 | |
| 43 | I | A | -0.9814 | |
| 44 | P | A | -0.8460 | |
| 45 | Q | A | -1.2258 | |
| 46 | N | A | -1.0815 | |
| 47 | F | A | -0.2558 | |
| 48 | I | A | 0.0000 | |
| 49 | A | A | -1.2716 | |
| 50 | D | A | -0.8427 | |
| 51 | Y | A | -0.1445 | |
| 52 | F | A | 0.1619 | |
| 53 | E | A | -1.2090 | |
| 54 | T | A | -0.9537 | |
| 55 | S | A | -1.0492 | |
| 56 | S | A | -1.2764 | |
| 57 | Q | A | -1.4833 | |
| 58 | C | A | -0.7310 | |
| 59 | S | A | -0.6685 | |
| 60 | K | A | -0.9458 | |
| 61 | P | A | -1.0955 | |
| 62 | S | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | I | A | -0.1786 | |
| 65 | F | A | 0.0000 | |
| 66 | L | A | -1.1331 | |
| 67 | T | A | -2.1271 | |
| 68 | K | A | -2.9136 | |
| 69 | R | A | -3.2221 | |
| 70 | G | A | -2.8370 | |
| 71 | R | A | -3.1261 | |
| 72 | Q | A | -2.1615 | |
| 73 | V | A | -0.3840 | |
| 74 | C | A | 0.4347 | |
| 75 | A | A | 0.0000 | |
| 76 | D | A | -1.0991 | |
| 77 | P | A | -1.6239 | |
| 78 | S | A | -1.4267 | |
| 79 | E | A | -2.5262 | |
| 80 | E | A | -3.2822 | |
| 81 | W | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | Q | A | -2.8817 | |
| 84 | K | A | -3.1679 | |
| 85 | Y | A | 0.0000 | |
| 86 | V | A | -1.2063 | |
| 87 | S | A | -1.2091 | |
| 88 | D | A | -1.0123 | |
| 89 | L | A | -0.9046 | |
| 90 | E | A | -1.3329 | |
| 91 | L | A | 0.5613 | |
| 92 | S | A | -0.0119 | |
| 93 | A | A | -0.2614 |