| Chain sequence(s) |
A: HVQLVESGGGSVQAGGSLRLSCAASGYSYCSYDMSWYRQAPGKEREFVATIDSYGDTSYADSVKGRFTISQDNAKNTLYLQMNSLKPEDTAMYYCATTPYGGWRYFGYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | H | A | -1.2525 | |
| 2 | V | A | -0.6956 | |
| 3 | Q | A | -1.0700 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.3355 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.7349 | |
| 8 | G | A | -1.2335 | |
| 9 | G | A | -1.2055 | |
| 10 | G | A | -0.9369 | |
| 11 | S | A | -0.7091 | |
| 12 | V | A | -0.7534 | |
| 13 | Q | A | -1.5976 | |
| 14 | A | A | -1.6310 | |
| 15 | G | A | -1.3391 | |
| 16 | G | A | -1.0706 | |
| 17 | S | A | -1.2199 | |
| 18 | L | A | -1.1608 | |
| 19 | R | A | -2.1522 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4848 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.3247 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.7013 | |
| 26 | G | A | -0.9649 | |
| 27 | Y | A | -0.3325 | |
| 28 | S | A | -0.4519 | |
| 29 | Y | A | 0.0000 | |
| 30 | C | A | 0.2002 | |
| 31 | S | A | 0.4244 | |
| 32 | Y | A | 0.1656 | |
| 33 | D | A | -0.7739 | |
| 34 | M | A | 0.0000 | |
| 35 | S | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.0599 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.9415 | |
| 40 | A | A | -1.9771 | |
| 41 | P | A | -1.4349 | |
| 42 | G | A | -1.9636 | |
| 43 | K | A | -3.2818 | |
| 44 | E | A | -3.3543 | |
| 45 | R | A | -2.3497 | |
| 46 | E | A | -1.1966 | |
| 47 | F | A | -0.0348 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | T | A | -0.5773 | |
| 51 | I | A | 0.0000 | |
| 52 | D | A | -1.0293 | |
| 53 | S | A | -0.1393 | |
| 54 | Y | A | 0.3298 | |
| 55 | G | A | -0.9286 | |
| 56 | D | A | -1.9232 | |
| 57 | T | A | -1.1168 | |
| 58 | S | A | -0.9415 | |
| 59 | Y | A | -0.8727 | |
| 60 | A | A | -1.2475 | |
| 61 | D | A | -2.4276 | |
| 62 | S | A | -1.7686 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.6644 | |
| 65 | G | A | -1.7918 | |
| 66 | R | A | -1.4977 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.8845 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.7098 | |
| 71 | Q | A | -1.0621 | |
| 72 | D | A | -1.5578 | |
| 73 | N | A | -1.8989 | |
| 74 | A | A | -1.5110 | |
| 75 | K | A | -2.3332 | |
| 76 | N | A | -1.6344 | |
| 77 | T | A | -1.0481 | |
| 78 | L | A | 0.0000 | |
| 79 | Y | A | -0.5849 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2550 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.4100 | |
| 84 | S | A | -1.2199 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.2965 | |
| 87 | P | A | -1.8341 | |
| 88 | E | A | -2.2940 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -1.1429 | |
| 91 | A | A | 0.0000 | |
| 92 | M | A | -0.6481 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.1767 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | T | A | 0.0000 | |
| 98 | T | A | 0.3083 | |
| 99 | P | A | 0.5364 | |
| 100 | Y | A | 0.7929 | |
| 101 | G | A | -0.1499 | |
| 102 | G | A | -0.0752 | |
| 103 | W | A | 0.4619 | |
| 104 | R | A | -0.6696 | |
| 105 | Y | A | 0.8870 | |
| 106 | F | A | 0.9915 | |
| 107 | G | A | 0.6317 | |
| 108 | Y | A | 0.8874 | |
| 109 | W | A | 0.5041 | |
| 110 | G | A | -0.1551 | |
| 111 | Q | A | -0.9431 | |
| 112 | G | A | 0.0000 | |
| 113 | T | A | -0.8291 | |
| 114 | Q | A | -1.3575 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.9513 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -1.1313 | |
| 119 | S | A | -0.8442 |