Project name: 2_29_CLas_Aggrescan3D

Status: done

Started: 2026-05-07 20:07:37
Settings
Chain sequence(s) A: IRTFLFQPSVIPSGSMIPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIGLPGDRISLEKGIIYINGAPVVRHMEGYFSYHYKEDWSSNVPIFQEKLSNGVLYNVLSQDFLAPSSNISEFLVPKGHYFMMGDNRDKSKDSRWVEVGFVPEENLVGRASFVLFSIGGDTPFSKVWLWIPNMRWDRLFKIL
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:39)
Show buried residues

Minimal score value
-2.1848
Maximal score value
2.0151
Average score
-0.0285
Total score value
-6.2446

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 1.6855
2 R A -1.4937
3 T A -0.0407
4 F A 1.9542
5 L A 1.2628
6 F A 1.0262
7 Q A -0.0100
8 P A -0.1007
9 S A 0.1459
10 V A 1.0872
11 I A 0.0000
12 P A -0.2907
13 S A -0.2464
14 G A 0.0000
15 S A -0.0286
16 M A 0.0000
17 I A 0.0000
18 P A -0.0377
19 T A -0.0150
20 L A 0.0000
21 L A 0.2085
22 V A 0.2519
23 G A -0.0350
24 D A 0.0000
25 Y A 0.4045
26 I A 0.0000
27 I A 0.1871
28 V A 0.0000
29 N A -0.0832
30 K A 0.0000
31 F A 1.4739
32 S A 0.2278
33 Y A 0.0000
34 G A 0.0000
35 Y A 0.0000
36 S A 0.0000
37 K A -0.4376
38 Y A 0.0383
39 S A 0.0000
40 F A 0.5127
41 P A 0.1938
42 F A 1.8829
43 S A 0.4718
44 Y A 1.0723
45 N A -0.7580
46 L A 1.4545
47 F A 0.8002
48 N A -1.1529
49 G A -0.3619
50 R A -0.0261
51 I A 1.3449
52 F A 1.9198
53 N A -0.8920
54 N A -0.9710
55 Q A -0.8134
56 P A 0.0000
57 R A -1.8819
58 R A -0.5448
59 G A 0.0000
60 D A -0.3672
61 V A 0.0000
62 V A 0.0000
63 V A 0.0000
64 F A 0.0000
65 R A -0.4976
66 Y A 0.0000
67 P A -0.3652
68 K A -1.8637
69 D A -1.1622
70 P A -0.2998
71 S A -0.0065
72 I A 0.8649
73 D A -1.5657
74 Y A -0.0946
75 V A 0.2615
76 K A 0.0000
77 R A 0.0000
78 V A 0.0000
79 I A 0.0000
80 G A 0.0000
81 L A 0.2326
82 P A -0.2534
83 G A -0.3288
84 D A 0.0000
85 R A -0.9152
86 I A 0.0000
87 S A -0.2959
88 L A 0.0000
89 E A -2.0360
90 K A -1.1283
91 G A 0.0000
92 I A 0.4488
93 I A 0.0000
94 Y A 0.4002
95 I A 0.0000
96 N A -1.3146
97 G A -0.6597
98 A A -0.0804
99 P A -0.1620
100 V A 0.0000
101 V A 1.3787
102 R A -0.2104
103 H A -0.9201
104 M A 0.1950
105 E A -1.7240
106 G A -0.2254
107 Y A 1.3673
108 F A 0.6289
109 S A -0.1494
110 Y A 0.0000
111 H A -0.7979
112 Y A -0.3937
113 K A -2.0041
114 E A -2.1848
115 D A -0.4229
116 W A 0.9826
117 S A 0.1558
118 S A -0.4795
119 N A -1.2754
120 V A -0.0201
121 P A 0.0000
122 I A 0.2660
123 F A 0.2755
124 Q A -0.4109
125 E A 0.0000
126 K A -1.1785
127 L A 0.0000
128 S A -0.4401
129 N A -1.3945
130 G A -0.5932
131 V A 0.6598
132 L A 0.9234
133 Y A 0.0000
134 N A -0.4750
135 V A 0.0000
136 L A 0.0000
137 S A 0.0000
138 Q A -1.4308
139 D A -1.4176
140 F A 0.4647
141 L A 1.6462
142 A A 0.2444
143 P A -0.2582
144 S A -0.0744
145 S A 0.0000
146 N A -0.6714
147 I A 0.1311
148 S A -0.4981
149 E A -1.7755
150 F A 0.4356
151 L A 1.5125
152 V A 0.0000
153 P A -0.3943
154 K A -1.7367
155 G A -0.4399
156 H A -0.2839
157 Y A 0.0000
158 F A 0.0000
159 M A 0.0000
160 M A 0.0000
161 G A 0.0000
162 D A 0.0000
163 N A 0.0000
164 R A 0.0000
165 D A -1.2550
166 K A -1.1805
167 S A 0.0000
168 K A -0.9193
169 D A 0.0000
170 S A 0.0000
171 R A -0.0719
172 W A 0.9755
173 V A 1.8042
174 E A -0.1299
175 V A 0.0000
176 G A 0.1593
177 F A 0.4578
178 V A 0.0000
179 P A -0.1349
180 E A -0.4714
181 E A -0.6794
182 N A 0.0000
183 L A 0.0000
184 V A 0.0000
185 G A 0.0000
186 R A -0.7182
187 A A 0.0000
188 S A 0.0246
189 F A 0.5460
190 V A 0.0000
191 L A 0.8413
192 F A 0.4238
193 S A 0.0000
194 I A 0.0000
195 G A 0.0000
196 G A -0.6676
197 D A -1.2158
198 T A -0.2371
199 P A 0.0429
200 F A 0.9441
201 S A -0.1775
202 K A -0.5308
203 V A 1.8389
204 W A 1.5922
205 L A 0.7588
206 W A 0.7172
207 I A 2.0151
208 P A 0.0276
209 N A -0.4349
210 M A -0.0006
211 R A -0.0996
212 W A 0.8083
213 D A -1.6115
214 R A -0.4035
215 L A 0.8869
216 F A 1.9556
217 K A -0.1098
218 I A 1.9853
219 L A 0.8158
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Laboratory of Theory of Biopolymers 2018