| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFSDIVVNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSIGHPLFNKLGDTENPTAPQHETADVRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGHPLPDAPPPSPLYVKPPASSPYATPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPENNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9501 | |
| 2 | L | A | 1.9762 | |
| 3 | P | A | 0.6499 | |
| 4 | P | A | 0.3434 | |
| 5 | T | A | 0.1016 | |
| 6 | T | A | 0.1247 | |
| 7 | P | A | 0.1610 | |
| 8 | V | A | 1.2123 | |
| 9 | A | A | 0.0200 | |
| 10 | K | A | -1.1486 | |
| 11 | V | A | -0.3976 | |
| 12 | Q | A | -1.5161 | |
| 13 | S | A | -1.6012 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4201 | |
| 16 | E | A | -2.4383 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4591 | |
| 20 | P | A | 0.1085 | |
| 21 | T | A | 0.1173 | |
| 22 | S | A | -0.1700 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1025 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.0765 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.3669 | |
| 31 | R | A | -2.4061 | |
| 32 | L | A | -0.6347 | |
| 33 | L | A | 1.2715 | |
| 34 | T | A | 1.4463 | |
| 35 | V | A | 1.9689 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.1966 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1314 | |
| 40 | S | A | -0.1167 | |
| 41 | D | A | 0.0904 | |
| 42 | I | A | 1.7810 | |
| 43 | V | A | 2.6116 | |
| 44 | V | A | 1.9281 | |
| 45 | N | A | -0.3440 | |
| 46 | G | A | -0.2439 | |
| 47 | K | A | 0.0311 | |
| 48 | V | A | 2.3725 | |
| 49 | V | A | 2.8309 | |
| 50 | V | A | 1.8789 | |
| 51 | P | A | 0.7368 | |
| 52 | K | A | -0.0803 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1319 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4308 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2633 | |
| 70 | K | A | -1.8069 | |
| 71 | F | A | -0.6558 | |
| 72 | A | A | -0.5773 | |
| 73 | L | A | -0.8667 | |
| 74 | P | A | -1.2585 | |
| 75 | Q | A | -2.4756 | |
| 76 | K | A | -3.0913 | |
| 77 | D | A | -2.9845 | |
| 78 | F | A | -1.6383 | |
| 79 | Y | A | -1.9124 | |
| 80 | D | A | -2.7480 | |
| 81 | P | A | -2.3454 | |
| 82 | E | A | -3.0647 | |
| 83 | K | A | -3.4357 | |
| 84 | E | A | -2.4955 | |
| 85 | R | A | -1.3091 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6460 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9722 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3087 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6677 | |
| 99 | G | A | -0.5307 | |
| 100 | P | A | -0.4021 | |
| 101 | L | A | 0.0392 | |
| 102 | G | A | -0.2253 | |
| 103 | K | A | -0.6970 | |
| 104 | G | A | -0.5762 | |
| 105 | S | A | -0.5868 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1086 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4312 | |
| 110 | L | A | 0.3995 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9728 | |
| 113 | K | A | -0.4101 | |
| 114 | L | A | -1.1422 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2959 | |
| 117 | T | A | -1.2223 | |
| 118 | E | A | -2.6351 | |
| 119 | N | A | -2.3513 | |
| 120 | P | A | -1.6460 | |
| 121 | T | A | -0.8847 | |
| 122 | A | A | -0.6414 | |
| 123 | P | A | -0.5885 | |
| 124 | Q | A | -1.5324 | |
| 125 | H | A | -2.1542 | |
| 126 | E | A | -2.6879 | |
| 127 | T | A | -1.8048 | |
| 128 | A | A | -1.2774 | |
| 129 | D | A | -2.0797 | |
| 130 | V | A | -1.3994 | |
| 131 | R | A | -0.7620 | |
| 132 | V | A | 0.4089 | |
| 133 | A | A | 0.4502 | |
| 134 | F | A | 0.2828 | |
| 135 | S | A | -0.1093 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7710 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5494 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2400 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1634 | |
| 157 | D | A | 0.3465 | |
| 158 | L | A | 0.8570 | |
| 159 | A | A | 0.1957 | |
| 160 | E | A | -1.4375 | |
| 161 | P | A | -0.2025 | |
| 162 | C | A | 0.1915 | |
| 163 | P | A | -0.1620 | |
| 164 | G | A | -0.0622 | |
| 165 | L | A | 0.6103 | |
| 166 | P | A | -0.1034 | |
| 167 | P | A | -0.3357 | |
| 168 | G | A | -0.4177 | |
| 169 | A | A | -0.0154 | |
| 170 | C | A | 0.6683 | |
| 171 | P | A | 0.5371 | |
| 172 | P | A | 0.7849 | |
| 173 | I | A | 1.9939 | |
| 174 | Q | A | 0.8549 | |
| 175 | L | A | 1.5154 | |
| 176 | V | A | 0.8544 | |
| 177 | N | A | -0.3494 | |
| 178 | S | A | 0.0056 | |
| 179 | V | A | 0.3925 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3650 | |
| 182 | D | A | 0.0635 | |
| 183 | G | A | -0.1638 | |
| 184 | D | A | -0.5667 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1575 | |
| 190 | F | A | 0.0575 | |
| 191 | G | A | -0.1062 | |
| 192 | N | A | -0.2781 | |
| 193 | M | A | -0.1318 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4086 | |
| 197 | E | A | -2.5750 | |
| 198 | L | A | -1.2024 | |
| 199 | Q | A | -2.5398 | |
| 200 | Q | A | -3.3389 | |
| 201 | D | A | -3.6007 | |
| 202 | R | A | -3.3434 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4223 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3880 | |
| 211 | S | A | -1.7504 | |
| 212 | T | A | -1.4796 | |
| 213 | R | A | -2.1568 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1722 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2849 | |
| 220 | L | A | 0.4925 | |
| 221 | K | A | -1.3325 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9756 | |
| 224 | N | A | -1.7055 | |
| 225 | E | A | -1.3321 | |
| 226 | A | A | -0.6774 | |
| 227 | Y | A | -0.4590 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7110 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1385 | |
| 234 | F | A | 0.0345 | |
| 235 | G | A | -0.9005 | |
| 236 | R | A | -2.6519 | |
| 237 | R | A | -2.9021 | |
| 238 | E | A | -2.1781 | |
| 239 | Q | A | -0.1290 | |
| 240 | V | A | 1.5763 | |
| 241 | Y | A | 1.2815 | |
| 242 | A | A | 0.1834 | |
| 243 | R | A | -1.3285 | |
| 244 | H | A | -1.1606 | |
| 245 | F | A | -0.1616 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5567 | |
| 249 | A | A | -1.2622 | |
| 250 | G | A | -1.0787 | |
| 251 | P | A | -1.1456 | |
| 252 | E | A | -1.3714 | |
| 253 | G | A | -1.2831 | |
| 254 | H | A | -1.4782 | |
| 255 | P | A | -1.2905 | |
| 256 | L | A | -0.3561 | |
| 257 | P | A | -0.9114 | |
| 258 | D | A | -1.9681 | |
| 259 | A | A | -0.8269 | |
| 260 | P | A | -0.9771 | |
| 261 | P | A | -0.6934 | |
| 262 | P | A | -0.1603 | |
| 263 | S | A | -0.0161 | |
| 264 | P | A | 0.6843 | |
| 265 | L | A | 1.5509 | |
| 266 | Y | A | 1.1609 | |
| 267 | V | A | 1.1557 | |
| 268 | K | A | -0.8942 | |
| 269 | P | A | -0.3575 | |
| 270 | P | A | -0.4195 | |
| 271 | A | A | -0.3165 | |
| 272 | S | A | -0.1997 | |
| 273 | S | A | -0.1904 | |
| 274 | P | A | -0.1372 | |
| 275 | Y | A | 0.3471 | |
| 276 | A | A | -0.0881 | |
| 277 | T | A | -0.0200 | |
| 278 | P | A | -0.0603 | |
| 279 | P | A | -0.6967 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4141 | |
| 282 | D | A | -0.9196 | |
| 283 | Y | A | 0.8967 | |
| 284 | F | A | 0.7078 | |
| 285 | G | A | 0.1417 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8425 | |
| 291 | L | A | 1.6565 | |
| 292 | V | A | 0.6565 | |
| 293 | S | A | -0.1620 | |
| 294 | S | A | -0.9918 | |
| 295 | D | A | -1.8735 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0397 | |
| 298 | L | A | -1.1837 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6613 | |
| 301 | R | A | -1.9274 | |
| 302 | P | A | -0.9794 | |
| 303 | F | A | -0.1903 | |
| 304 | W | A | -0.5222 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0819 | |
| 307 | R | A | -2.9254 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7858 | |
| 310 | G | A | -1.4269 | |
| 311 | N | A | -1.3994 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8284 | |
| 319 | N | A | -0.8602 | |
| 320 | E | A | -1.0363 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3388 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1722 | |
| 333 | N | A | 0.3960 | |
| 334 | F | A | 1.4654 | |
| 335 | T | A | 0.7406 | |
| 336 | I | A | 0.3632 | |
| 337 | S | A | -1.0914 | |
| 338 | Q | A | -1.9568 | |
| 339 | Q | A | -1.7164 | |
| 340 | L | A | 0.1245 | |
| 341 | S | A | -0.3403 | |
| 342 | T | A | -0.9856 | |
| 343 | P | A | -1.4952 | |
| 344 | E | A | -2.5787 | |
| 345 | N | A | -2.0347 | |
| 346 | N | A | -1.3066 | |
| 347 | V | A | 0.8129 | |
| 348 | Y | A | 1.1447 | |
| 349 | D | A | -0.1837 | |
| 350 | P | A | -0.9703 | |
| 351 | S | A | -0.7017 | |
| 352 | N | A | -0.7553 | |
| 353 | F | A | -1.2460 | |
| 354 | K | A | -2.1041 | |
| 355 | N | A | -1.8466 | |
| 356 | Y | A | -0.1651 | |
| 357 | L | A | 0.5583 | |
| 358 | R | A | 0.8968 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4409 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0126 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.7829 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6027 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2702 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3230 | |
| 376 | L | A | -1.7577 | |
| 377 | D | A | -2.0474 | |
| 378 | P | A | -1.0693 | |
| 379 | G | A | -1.0262 | |
| 380 | V | A | -0.9369 | |
| 381 | L | A | -0.5473 | |
| 382 | A | A | -0.6628 | |
| 383 | H | A | -0.8465 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4015 | |
| 386 | T | A | -0.5745 | |
| 387 | M | A | -0.3297 | |
| 388 | N | A | -0.8641 | |
| 389 | P | A | -1.2515 | |
| 390 | T | A | -1.4504 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4488 | |
| 393 | E | A | -2.9651 | |
| 394 | N | A | -2.6161 | |
| 395 | W | A | -1.3903 | |
| 396 | N | A | -1.2278 | |
| 397 | L | A | -0.1769 | |
| 398 | G | A | 0.5698 | |
| 399 | F | A | 2.4304 | |
| 400 | V | A | 2.0492 | |
| 401 | P | A | 0.0732 | |
| 402 | P | A | -1.7681 | |
| 403 | K | A | -3.4113 | |
| 404 | E | A | -3.8192 | |
| 405 | R | A | -3.8476 | |
| 406 | E | A | -3.7116 | |
| 407 | D | A | -2.8446 | |
| 408 | P | A | -1.7175 | |
| 409 | Y | A | -0.9709 | |
| 410 | K | A | -2.0882 | |
| 411 | G | A | -0.6182 | |
| 412 | L | A | 0.7562 | |
| 413 | I | A | 1.5820 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3974 | |
| 416 | E | A | -1.6699 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8696 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9216 | |
| 421 | E | A | -2.5574 | |
| 422 | R | A | -2.0783 | |
| 423 | F | A | -1.0722 | |
| 424 | S | A | -1.3363 | |
| 425 | Q | A | -1.7721 | |
| 426 | D | A | -2.8727 | |
| 427 | L | A | -1.9607 | |
| 428 | D | A | -2.7439 | |
| 429 | Q | A | -2.5730 | |
| 430 | F | A | -1.3685 | |
| 431 | A | A | -0.8567 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5352 | |
| 435 | K | A | -0.6962 | |
| 436 | F | A | 0.1790 | |
| 437 | L | A | 1.0461 | |
| 438 | Y | A | 0.8369 | |
| 439 | Q | A | -0.2615 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine