Project name: 2cf3957f78e0a18

Status: done

Started: 2025-07-20 00:25:10
Settings
Chain sequence(s) A: VLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:35)
Show buried residues

Minimal score value
-4.1624
Maximal score value
1.1602
Average score
-1.3631
Total score value
-207.1888

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.1602
2 L A 0.0097
3 S A -1.0386
4 E A -2.3556
5 G A -1.9077
6 E A -1.7572
7 W A 0.0000
8 Q A -2.1006
9 L A -1.1618
10 V A 0.0000
11 L A -1.0366
12 H A -0.8799
13 V A 0.0000
14 W A 0.0000
15 A A -0.9436
16 K A -1.6422
17 V A 0.0000
18 E A -1.8160
19 A A -1.4440
20 D A -1.8892
21 V A -1.1000
22 A A -1.1658
23 G A -1.1981
24 H A 0.0000
25 G A 0.0000
26 Q A -1.5548
27 D A -1.9703
28 I A 0.0000
29 L A 0.0000
30 I A 0.0000
31 R A -2.2256
32 L A 0.0000
33 F A 0.0000
34 K A -2.4125
35 S A -1.5445
36 H A -1.1596
37 P A -1.8952
38 E A -2.0787
39 T A 0.0000
40 L A -2.6116
41 E A -3.6318
42 K A -2.9620
43 F A -2.9771
44 D A -3.8920
45 R A -3.8744
46 F A 0.0000
47 K A -4.1624
48 H A -3.1531
49 L A -2.5544
50 K A -2.6632
51 T A -2.2109
52 E A -2.4096
53 A A -1.7927
54 E A -2.3984
55 M A 0.0000
56 K A -2.6509
57 A A -1.9806
58 S A -2.5578
59 E A -3.5735
60 D A -3.6561
61 L A 0.0000
62 K A -3.0284
63 K A -3.0131
64 H A -1.8086
65 G A 0.0000
66 V A -0.3947
67 T A -0.0786
68 V A 0.4165
69 L A 0.0000
70 T A 0.1399
71 A A 0.2047
72 L A 0.0000
73 G A 0.0000
74 A A -0.8346
75 I A 0.0000
76 L A 0.0000
77 K A -2.7104
78 K A -2.8150
79 K A -2.7283
80 G A -1.6036
81 H A -2.4032
82 H A 0.0000
83 E A -2.6917
84 A A -1.7361
85 E A -1.7877
86 L A 0.0000
87 K A -2.7641
88 P A -1.7472
89 L A -0.9838
90 A A 0.0000
91 Q A -2.2587
92 S A -1.9387
93 H A -1.5642
94 A A 0.0000
95 T A -1.6422
96 K A -2.5954
97 H A -2.3125
98 K A -2.1752
99 I A -1.1613
100 P A -0.8407
101 I A -0.9245
102 K A -1.6387
103 Y A -1.0378
104 L A 0.0000
105 E A -2.1460
106 F A -1.1995
107 I A -0.8923
108 S A 0.0000
109 E A -2.2555
110 A A 0.0000
111 I A 0.0000
112 I A -1.1120
113 H A -2.0000
114 V A 0.0000
115 L A 0.0000
116 H A -1.8313
117 S A -1.7314
118 R A -2.6677
119 H A -1.9181
120 P A -1.5267
121 G A -1.2571
122 D A -1.5301
123 F A 0.0000
124 G A -1.2388
125 A A -1.1758
126 D A -2.1375
127 A A 0.0000
128 Q A -1.4758
129 G A -1.3933
130 A A 0.0000
131 M A 0.0000
132 N A -1.8591
133 K A -1.3278
134 A A 0.0000
135 L A 0.0000
136 E A -2.4819
137 L A 0.0000
138 F A -1.2582
139 R A -2.0125
140 K A -2.3614
141 D A -2.0735
142 I A 0.0000
143 A A -1.5752
144 A A -1.9233
145 K A -2.6794
146 Y A 0.0000
147 K A -3.0741
148 E A -2.8684
149 L A -1.4369
150 G A -1.6378
151 Y A -1.6921
152 Q A -2.1597
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018