| Chain sequence(s) |
H: EVQLQQSGAELARPGASVKMSCKASGYTFTSYTIHWVKQRPGQGLEWIGYINPSSGYTNYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARVAMDYWGQGTSVTVSS
L: DIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPYTFGGGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:13)
[INFO] Main: Simulation completed successfully. (00:02:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9550 | |
| 2 | V | H | -1.0319 | |
| 3 | Q | H | -1.4778 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.1102 | |
| 6 | Q | H | -1.4294 | |
| 7 | S | H | -1.1457 | |
| 8 | G | H | -0.8590 | |
| 9 | A | H | -0.2288 | |
| 11 | E | H | -0.3441 | |
| 12 | L | H | 0.6380 | |
| 13 | A | H | -0.6003 | |
| 14 | R | H | -1.9486 | |
| 15 | P | H | -1.7110 | |
| 16 | G | H | -1.2102 | |
| 17 | A | H | -1.0523 | |
| 18 | S | H | -1.0919 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.3628 | |
| 21 | M | H | 0.0000 | |
| 22 | S | H | -0.8071 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.7668 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.1762 | |
| 27 | G | H | -1.0092 | |
| 28 | Y | H | -0.3393 | |
| 29 | T | H | -0.2411 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.6297 | |
| 36 | S | H | -0.1169 | |
| 37 | Y | H | 0.3562 | |
| 38 | T | H | 0.2869 | |
| 39 | I | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.8412 | |
| 45 | R | H | -1.4235 | |
| 46 | P | H | -1.0453 | |
| 47 | G | H | -1.3435 | |
| 48 | Q | H | -1.9200 | |
| 49 | G | H | -1.3170 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0935 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Y | H | 0.1996 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.0867 | |
| 58 | P | H | 0.0000 | |
| 59 | S | H | -0.5390 | |
| 62 | S | H | -0.1952 | |
| 63 | G | H | -0.1012 | |
| 64 | Y | H | 0.8572 | |
| 65 | T | H | 0.1849 | |
| 66 | N | H | -0.6117 | |
| 67 | Y | H | -1.2320 | |
| 68 | N | H | -1.9773 | |
| 69 | Q | H | -3.0528 | |
| 70 | K | H | -3.0693 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.3548 | |
| 74 | D | H | -3.1500 | |
| 75 | K | H | -2.1576 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.9516 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3222 | |
| 80 | A | H | -0.7662 | |
| 81 | D | H | -1.5298 | |
| 82 | K | H | -1.9072 | |
| 83 | S | H | -1.1232 | |
| 84 | S | H | -0.9687 | |
| 85 | S | H | -1.1319 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3814 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -1.0461 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.0656 | |
| 93 | S | H | -1.0492 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2831 | |
| 96 | S | H | -1.3135 | |
| 97 | E | H | -1.7219 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.5932 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0230 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | V | H | 0.6750 | |
| 108 | A | H | 0.4461 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.0267 | |
| 117 | Y | H | 0.3216 | |
| 118 | W | H | -0.2514 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.7570 | |
| 121 | G | H | -0.7972 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.1667 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2042 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6762 | |
| 128 | S | H | -0.7875 | |
| 1 | D | L | -2.2755 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2855 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3462 | |
| 6 | Q | L | -1.0686 | |
| 7 | S | L | -0.7016 | |
| 8 | P | L | -0.5813 | |
| 9 | S | L | -0.8245 | |
| 10 | S | L | -0.9915 | |
| 11 | L | L | -0.4800 | |
| 12 | S | L | -0.6663 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.8247 | |
| 15 | L | L | -0.5596 | |
| 16 | G | L | -1.3367 | |
| 17 | E | L | -1.8958 | |
| 18 | R | L | -2.3379 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.5844 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.8757 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8225 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.2360 | |
| 27 | Q | L | -2.6943 | |
| 28 | E | L | -2.2793 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.5536 | |
| 37 | G | L | 0.0549 | |
| 38 | Y | L | 1.2203 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | L | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5097 | |
| 46 | P | L | -1.3676 | |
| 47 | D | L | -2.2455 | |
| 48 | G | L | -1.4933 | |
| 49 | T | L | -1.2226 | |
| 50 | I | L | 0.0000 | |
| 51 | K | L | -0.7234 | |
| 52 | R | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.6863 | |
| 56 | A | L | 0.5164 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.1973 | |
| 66 | T | L | 0.0533 | |
| 67 | L | L | -0.1634 | |
| 68 | D | L | -0.5039 | |
| 69 | S | L | -0.4789 | |
| 70 | G | L | -0.7335 | |
| 71 | V | L | -0.7049 | |
| 72 | P | L | -1.1943 | |
| 74 | K | L | -1.8753 | |
| 75 | R | L | -1.5389 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.5893 | |
| 78 | G | L | -0.4526 | |
| 79 | S | L | -0.9804 | |
| 80 | R | L | -1.8335 | |
| 83 | S | L | -1.3718 | |
| 84 | G | L | -1.4472 | |
| 85 | S | L | -1.9728 | |
| 86 | D | L | -1.9329 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.9082 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6121 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.5654 | |
| 93 | S | L | -1.7364 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -2.1686 | |
| 96 | S | L | -1.3530 | |
| 97 | E | L | -2.0617 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.8344 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.2406 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.8905 | |
| 108 | A | L | 0.4414 | |
| 109 | S | L | 0.1847 | |
| 114 | Y | L | 0.1677 | |
| 115 | P | L | -0.5474 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | -0.6275 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0382 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.7426 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.9005 | |
| 126 | L | L | 0.4239 | |
| 127 | K | L | -1.0952 |