| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDASSYYGVVSYYRITYGETGGNSPVQEFTVPGYSSTATISGLKPGVDYTITVYASYYYWYTSYTKSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8616 | |
| 2 | S | A | 0.7193 | |
| 3 | S | A | 0.5235 | |
| 4 | V | A | 0.0435 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6035 | |
| 7 | K | A | -2.6435 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9599 | |
| 10 | V | A | 0.0401 | |
| 11 | V | A | 1.4933 | |
| 12 | A | A | 0.8620 | |
| 13 | A | A | 0.2754 | |
| 14 | T | A | -0.5437 | |
| 15 | P | A | -1.1459 | |
| 16 | T | A | -1.0065 | |
| 17 | S | A | -0.5533 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.6999 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.8134 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.5676 | |
| 24 | A | A | -0.5508 | |
| 25 | S | A | 0.0910 | |
| 26 | S | A | 0.6077 | |
| 27 | Y | A | 1.7839 | |
| 28 | Y | A | 1.4044 | |
| 29 | G | A | 1.3439 | |
| 30 | V | A | 2.3928 | |
| 31 | V | A | 0.0000 | |
| 32 | S | A | 1.1444 | |
| 33 | Y | A | 0.6796 | |
| 34 | Y | A | 0.0000 | |
| 35 | R | A | -1.0399 | |
| 36 | I | A | 0.0000 | |
| 37 | T | A | -0.3917 | |
| 38 | Y | A | -0.0851 | |
| 39 | G | A | 0.0000 | |
| 40 | E | A | -1.4598 | |
| 41 | T | A | -1.1887 | |
| 42 | G | A | -1.2076 | |
| 43 | G | A | -1.3030 | |
| 44 | N | A | -1.5054 | |
| 45 | S | A | -0.8137 | |
| 46 | P | A | -0.2277 | |
| 47 | V | A | 0.6150 | |
| 48 | Q | A | -0.5119 | |
| 49 | E | A | -1.1199 | |
| 50 | F | A | -0.5595 | |
| 51 | T | A | -0.4122 | |
| 52 | V | A | 0.0000 | |
| 53 | P | A | 0.1882 | |
| 54 | G | A | 0.8779 | |
| 55 | Y | A | 1.5474 | |
| 56 | S | A | 0.3469 | |
| 57 | S | A | -0.2562 | |
| 58 | T | A | -0.1021 | |
| 59 | A | A | 0.0000 | |
| 60 | T | A | 0.2768 | |
| 61 | I | A | 0.0000 | |
| 62 | S | A | -0.6679 | |
| 63 | G | A | -1.0378 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -2.3459 | |
| 66 | P | A | -1.6360 | |
| 67 | G | A | -1.4072 | |
| 68 | V | A | -1.3570 | |
| 69 | D | A | -1.9813 | |
| 70 | Y | A | 0.0000 | |
| 71 | T | A | -0.7140 | |
| 72 | I | A | 0.0000 | |
| 73 | T | A | -0.1807 | |
| 74 | V | A | 0.0000 | |
| 75 | Y | A | -0.1706 | |
| 76 | A | A | 0.0000 | |
| 77 | S | A | 0.0000 | |
| 78 | Y | A | 0.0000 | |
| 79 | Y | A | 2.5556 | |
| 80 | Y | A | 2.2516 | |
| 81 | W | A | 2.3046 | |
| 82 | Y | A | 2.2998 | |
| 83 | T | A | 1.4868 | |
| 84 | S | A | 1.1398 | |
| 85 | Y | A | 1.0829 | |
| 86 | T | A | 0.0870 | |
| 87 | K | A | -0.3699 | |
| 88 | S | A | -0.2824 | |
| 89 | P | A | -0.2045 | |
| 90 | I | A | 0.0281 | |
| 91 | S | A | -0.3248 | |
| 92 | I | A | -0.6955 | |
| 93 | N | A | -1.7029 | |
| 94 | Y | A | -1.4411 | |
| 95 | R | A | -2.4915 | |
| 96 | T | A | -1.4905 |