Project name: query_structure

Status: done

Started: 2026-03-17 01:29:53
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDASSYYGVVSYYRITYGETGGNSPVQEFTVPGYSSTATISGLKPGVDYTITVYASYYYWYTSYTKSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:13)
Show buried residues

Minimal score value
-2.6435
Maximal score value
2.5556
Average score
-0.1356
Total score value
-13.0193

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.8616
2 S A 0.7193
3 S A 0.5235
4 V A 0.0435
5 P A 0.0000
6 T A -1.6035
7 K A -2.6435
8 L A 0.0000
9 E A -1.9599
10 V A 0.0401
11 V A 1.4933
12 A A 0.8620
13 A A 0.2754
14 T A -0.5437
15 P A -1.1459
16 T A -1.0065
17 S A -0.5533
18 L A 0.0000
19 L A 0.6999
20 I A 0.0000
21 S A -0.8134
22 W A 0.0000
23 D A -2.5676
24 A A -0.5508
25 S A 0.0910
26 S A 0.6077
27 Y A 1.7839
28 Y A 1.4044
29 G A 1.3439
30 V A 2.3928
31 V A 0.0000
32 S A 1.1444
33 Y A 0.6796
34 Y A 0.0000
35 R A -1.0399
36 I A 0.0000
37 T A -0.3917
38 Y A -0.0851
39 G A 0.0000
40 E A -1.4598
41 T A -1.1887
42 G A -1.2076
43 G A -1.3030
44 N A -1.5054
45 S A -0.8137
46 P A -0.2277
47 V A 0.6150
48 Q A -0.5119
49 E A -1.1199
50 F A -0.5595
51 T A -0.4122
52 V A 0.0000
53 P A 0.1882
54 G A 0.8779
55 Y A 1.5474
56 S A 0.3469
57 S A -0.2562
58 T A -0.1021
59 A A 0.0000
60 T A 0.2768
61 I A 0.0000
62 S A -0.6679
63 G A -1.0378
64 L A 0.0000
65 K A -2.3459
66 P A -1.6360
67 G A -1.4072
68 V A -1.3570
69 D A -1.9813
70 Y A 0.0000
71 T A -0.7140
72 I A 0.0000
73 T A -0.1807
74 V A 0.0000
75 Y A -0.1706
76 A A 0.0000
77 S A 0.0000
78 Y A 0.0000
79 Y A 2.5556
80 Y A 2.2516
81 W A 2.3046
82 Y A 2.2998
83 T A 1.4868
84 S A 1.1398
85 Y A 1.0829
86 T A 0.0870
87 K A -0.3699
88 S A -0.2824
89 P A -0.2045
90 I A 0.0281
91 S A -0.3248
92 I A -0.6955
93 N A -1.7029
94 Y A -1.4411
95 R A -2.4915
96 T A -1.4905
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Laboratory of Theory of Biopolymers 2018