| Chain sequence(s) |
A: DVKAVCSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGGGNRNNFESEDYCMVCKAM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.6435 | |
| 2 | V | A | -0.4019 | |
| 3 | K | A | -1.7499 | |
| 4 | A | A | -1.3107 | |
| 5 | V | A | -1.4253 | |
| 6 | C | A | 0.0000 | |
| 7 | S | A | -0.9887 | |
| 8 | Q | A | -1.9723 | |
| 9 | E | A | -2.1398 | |
| 10 | A | A | -1.1555 | |
| 11 | M | A | -0.3727 | |
| 12 | T | A | 0.2654 | |
| 13 | G | A | 0.0000 | |
| 14 | P | A | -0.5101 | |
| 15 | C | A | -0.3931 | |
| 16 | R | A | -1.0907 | |
| 17 | A | A | 0.3213 | |
| 18 | V | A | 1.8523 | |
| 19 | M | A | 0.9878 | |
| 20 | P | A | 0.0619 | |
| 21 | R | A | -0.7695 | |
| 22 | W | A | -1.1070 | |
| 23 | Y | A | -0.8254 | |
| 24 | F | A | 0.0000 | |
| 25 | D | A | -1.3273 | |
| 26 | L | A | -0.2247 | |
| 27 | S | A | -0.7099 | |
| 28 | K | A | -1.9367 | |
| 29 | G | A | -1.5361 | |
| 30 | K | A | -2.1961 | |
| 31 | C | A | 0.0000 | |
| 32 | V | A | -1.1306 | |
| 33 | R | A | -1.5797 | |
| 34 | F | A | 0.3416 | |
| 35 | I | A | 1.3499 | |
| 36 | Y | A | 0.6323 | |
| 37 | G | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | G | A | -0.8397 | |
| 40 | G | A | -0.8662 | |
| 41 | N | A | -1.5898 | |
| 42 | R | A | -2.1638 | |
| 43 | N | A | 0.0000 | |
| 44 | N | A | -1.2850 | |
| 45 | F | A | -1.3406 | |
| 46 | E | A | -2.2098 | |
| 47 | S | A | -1.7781 | |
| 48 | E | A | -1.9238 | |
| 49 | D | A | -1.3501 | |
| 50 | Y | A | 0.3352 | |
| 51 | C | A | 0.0000 | |
| 52 | M | A | 0.3080 | |
| 53 | V | A | 1.6841 | |
| 54 | C | A | 0.0000 | |
| 55 | K | A | -0.5922 | |
| 56 | A | A | 0.1576 | |
| 57 | M | A | 0.0572 |