Project name: query_structure

Status: done

Started: 2026-03-16 19:59:10
Settings
Chain sequence(s) A: CLPERFQCAVPGYCIPLPGVCDGVNDCQEDSDEPNCRAPGLR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:15)
Show buried residues

Minimal score value
-3.1023
Maximal score value
1.2478
Average score
-0.6891
Total score value
-28.9411

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.8451
2 L A 1.2478
3 P A 0.0165
4 E A -0.6481
5 R A -0.1301
6 F A 0.1255
7 Q A -0.5301
8 C A 0.0000
9 A A -0.7435
10 V A -0.5693
11 P A -0.2540
12 G A -0.2796
13 Y A -0.0208
14 C A 0.3447
15 I A 0.0000
16 P A 0.0310
17 L A 0.4529
18 P A -0.0969
19 G A 0.0000
20 V A -0.2689
21 C A -0.6280
22 D A -0.8618
23 G A -0.4817
24 V A -0.0740
25 N A -2.0168
26 D A -1.6449
27 C A 0.0000
28 Q A -2.5729
29 E A -3.1023
30 D A -2.7130
31 S A -1.9146
32 D A 0.0000
33 E A -1.7396
34 P A -1.7000
35 N A -1.8834
36 C A -1.4111
37 R A -2.1844
38 A A -0.9910
39 P A -0.6774
40 G A -0.5915
41 L A 0.1159
42 R A -1.3908
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Laboratory of Theory of Biopolymers 2018