| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDYYVITYGETGYWPYYWQEFEVPGSKSTATISGLKPGVDYTITVYAAGHYNSYYYSYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31)
[INFO] Main: Simulation completed successfully. (00:00:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6752 | |
| 2 | S | A | 0.3932 | |
| 3 | D | A | -0.1396 | |
| 4 | V | A | -0.4987 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.9784 | |
| 7 | D | A | -3.2794 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.0615 | |
| 10 | V | A | 0.1523 | |
| 11 | V | A | 1.5715 | |
| 12 | A | A | 0.9138 | |
| 13 | A | A | 0.3313 | |
| 14 | T | A | -0.3316 | |
| 15 | P | A | -1.1061 | |
| 16 | T | A | -0.9928 | |
| 17 | S | A | -0.5174 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7775 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1173 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.1372 | |
| 24 | A | A | -1.5977 | |
| 25 | P | A | -0.3902 | |
| 26 | A | A | 0.2760 | |
| 27 | V | A | 0.6228 | |
| 28 | T | A | -0.0153 | |
| 29 | V | A | -0.4209 | |
| 30 | D | A | -0.8841 | |
| 31 | Y | A | -0.9982 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | -0.6144 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -1.0859 | |
| 36 | Y | A | -0.4758 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -0.3224 | |
| 39 | T | A | -0.3862 | |
| 40 | G | A | 0.4484 | |
| 41 | Y | A | 2.1671 | |
| 42 | W | A | 2.2255 | |
| 43 | P | A | 1.5656 | |
| 44 | Y | A | 2.4224 | |
| 45 | Y | A | 1.9359 | |
| 46 | W | A | 0.5986 | |
| 47 | Q | A | -1.4225 | |
| 48 | E | A | -2.2331 | |
| 49 | F | A | -1.3555 | |
| 50 | E | A | -1.7891 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.2838 | |
| 53 | G | A | -1.1757 | |
| 54 | S | A | -1.2158 | |
| 55 | K | A | -2.1205 | |
| 56 | S | A | -1.4252 | |
| 57 | T | A | -0.7572 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.0752 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6527 | |
| 62 | G | A | -1.0254 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3575 | |
| 65 | P | A | -1.6676 | |
| 66 | G | A | -1.4680 | |
| 67 | V | A | -1.4174 | |
| 68 | D | A | -2.0308 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.5765 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.1768 | |
| 75 | A | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | G | A | 0.0000 | |
| 78 | H | A | 0.2796 | |
| 79 | Y | A | 1.0673 | |
| 80 | N | A | -0.3762 | |
| 81 | S | A | 0.3361 | |
| 82 | Y | A | 1.7479 | |
| 83 | Y | A | 1.9004 | |
| 84 | Y | A | 1.7109 | |
| 85 | S | A | 0.6067 | |
| 86 | Y | A | 0.3520 | |
| 87 | S | A | -0.0728 | |
| 88 | P | A | -0.1688 | |
| 89 | I | A | -0.2619 | |
| 90 | S | A | -0.6743 | |
| 91 | I | A | -0.7363 | |
| 92 | N | A | -1.7123 | |
| 93 | Y | A | -1.4617 | |
| 94 | R | A | -2.5262 | |
| 95 | T | A | -1.5120 |