| Chain sequence(s) |
A: MSSSQNNNSSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGLEYFSEILDVILKPVIDSSSGLLYGDEKKWYGMIHARYIRSERGLIAMHRKYLRGDFGSCPNISCDRQNTLPVGLSAVWGKSTVKIHCPRCKSNFHPKSDTQLDGAMFGPSFPDIFFSMLPNLTSPLDDPRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:25)
[INFO] Main: Simulation completed successfully. (00:01:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8625 | |
| 2 | S | A | -0.0546 | |
| 3 | S | A | -0.7022 | |
| 4 | S | A | -1.4308 | |
| 5 | Q | A | -2.6375 | |
| 6 | N | A | -3.0094 | |
| 7 | N | A | -2.4707 | |
| 8 | N | A | -2.5137 | |
| 9 | S | A | -1.5415 | |
| 10 | S | A | -0.8502 | |
| 11 | W | A | 0.0000 | |
| 12 | I | A | 0.0000 | |
| 13 | D | A | -0.8837 | |
| 14 | W | A | 0.3247 | |
| 15 | F | A | 0.0000 | |
| 16 | L | A | -0.5204 | |
| 17 | G | A | -0.5275 | |
| 18 | I | A | -0.2986 | |
| 19 | K | A | -1.9793 | |
| 20 | G | A | 0.0000 | |
| 21 | N | A | 0.0000 | |
| 22 | Q | A | -1.2649 | |
| 23 | F | A | 0.0000 | |
| 24 | L | A | 0.0000 | |
| 25 | C | A | 0.0000 | |
| 26 | R | A | -1.4309 | |
| 27 | V | A | 0.0000 | |
| 28 | P | A | -1.2800 | |
| 29 | T | A | -1.4349 | |
| 30 | D | A | -2.4142 | |
| 31 | Y | A | -1.3789 | |
| 32 | V | A | 0.0000 | |
| 33 | Q | A | -1.9261 | |
| 34 | D | A | -1.2584 | |
| 35 | T | A | 0.2904 | |
| 36 | F | A | 1.7433 | |
| 37 | N | A | 0.0000 | |
| 38 | Q | A | 0.0000 | |
| 39 | M | A | 1.3909 | |
| 40 | G | A | 0.2544 | |
| 41 | L | A | 0.2114 | |
| 42 | E | A | -0.2438 | |
| 43 | Y | A | 1.3035 | |
| 44 | F | A | 0.9260 | |
| 45 | S | A | -0.3463 | |
| 46 | E | A | -1.5290 | |
| 47 | I | A | -0.6551 | |
| 48 | L | A | -0.6861 | |
| 49 | D | A | -1.9927 | |
| 50 | V | A | -1.2696 | |
| 51 | I | A | 0.0000 | |
| 52 | L | A | -0.5588 | |
| 53 | K | A | -1.3177 | |
| 54 | P | A | -1.0185 | |
| 55 | V | A | 0.0174 | |
| 56 | I | A | 0.5594 | |
| 57 | D | A | -1.3287 | |
| 58 | S | A | 0.0000 | |
| 59 | S | A | 0.1371 | |
| 60 | S | A | 0.0247 | |
| 61 | G | A | -0.0896 | |
| 62 | L | A | 1.2448 | |
| 63 | L | A | 2.0966 | |
| 64 | Y | A | 1.6679 | |
| 65 | G | A | 0.2554 | |
| 66 | D | A | -0.4585 | |
| 67 | E | A | 0.0000 | |
| 68 | K | A | -0.7040 | |
| 69 | K | A | -0.7207 | |
| 70 | W | A | 0.0000 | |
| 71 | Y | A | 0.0000 | |
| 72 | G | A | 0.0000 | |
| 73 | M | A | 0.1813 | |
| 74 | I | A | 0.0000 | |
| 75 | H | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | R | A | -0.7500 | |
| 78 | Y | A | 0.0000 | |
| 79 | I | A | 0.0000 | |
| 80 | R | A | -1.9349 | |
| 81 | S | A | -1.9423 | |
| 82 | E | A | -2.6840 | |
| 83 | R | A | -2.2805 | |
| 84 | G | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | I | A | -0.1101 | |
| 87 | A | A | -0.6443 | |
| 88 | M | A | 0.0000 | |
| 89 | H | A | 0.0000 | |
| 90 | R | A | -0.8494 | |
| 91 | K | A | -0.9861 | |
| 92 | Y | A | -0.3083 | |
| 93 | L | A | 0.1197 | |
| 94 | R | A | -1.6919 | |
| 95 | G | A | -1.3732 | |
| 96 | D | A | -1.4011 | |
| 97 | F | A | 0.0000 | |
| 98 | G | A | -1.4938 | |
| 99 | S | A | -1.6186 | |
| 100 | C | A | 0.0000 | |
| 101 | P | A | -1.1656 | |
| 102 | N | A | -0.9054 | |
| 103 | I | A | 0.4412 | |
| 104 | S | A | -0.6363 | |
| 105 | C | A | 0.0000 | |
| 106 | D | A | -2.7133 | |
| 107 | R | A | -3.0245 | |
| 108 | Q | A | -2.3660 | |
| 109 | N | A | -1.6356 | |
| 110 | T | A | 0.0000 | |
| 111 | L | A | 0.0000 | |
| 112 | P | A | 0.0000 | |
| 113 | V | A | 0.0000 | |
| 114 | G | A | 0.0000 | |
| 115 | L | A | 1.1849 | |
| 116 | S | A | 0.7908 | |
| 117 | A | A | 0.8938 | |
| 118 | V | A | 1.5698 | |
| 119 | W | A | 0.3894 | |
| 120 | G | A | -0.7861 | |
| 121 | K | A | -1.1308 | |
| 122 | S | A | -0.5494 | |
| 123 | T | A | -0.7689 | |
| 124 | V | A | 0.0000 | |
| 125 | K | A | -0.6743 | |
| 126 | I | A | 0.0000 | |
| 127 | H | A | -1.5034 | |
| 128 | C | A | 0.0000 | |
| 129 | P | A | -1.8724 | |
| 130 | R | A | -2.9273 | |
| 131 | C | A | -1.8493 | |
| 132 | K | A | -2.4398 | |
| 133 | S | A | -1.7127 | |
| 134 | N | A | -1.3614 | |
| 135 | F | A | -1.1224 | |
| 136 | H | A | -1.7983 | |
| 137 | P | A | -2.0209 | |
| 138 | K | A | -2.4849 | |
| 139 | S | A | -2.4236 | |
| 140 | D | A | -2.8947 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | -1.9057 | |
| 143 | L | A | 0.0000 | |
| 144 | D | A | -0.5581 | |
| 145 | G | A | 0.0000 | |
| 146 | A | A | 0.0000 | |
| 147 | M | A | 0.0000 | |
| 148 | F | A | 0.0000 | |
| 149 | G | A | 0.3266 | |
| 150 | P | A | 0.2255 | |
| 151 | S | A | -0.6834 | |
| 152 | F | A | 0.0000 | |
| 153 | P | A | 0.0000 | |
| 154 | D | A | -1.5260 | |
| 155 | I | A | -0.5661 | |
| 156 | F | A | 0.0000 | |
| 157 | F | A | -0.0966 | |
| 158 | S | A | -0.3449 | |
| 159 | M | A | -0.4414 | |
| 160 | L | A | 0.1969 | |
| 161 | P | A | -0.6804 | |
| 162 | N | A | -1.3855 | |
| 163 | L | A | -0.5877 | |
| 164 | T | A | -0.6152 | |
| 165 | S | A | -0.5890 | |
| 166 | P | A | -0.6222 | |
| 167 | L | A | 0.1572 | |
| 168 | D | A | -1.6634 | |
| 169 | D | A | -1.6776 | |
| 170 | P | A | -1.5917 | |
| 171 | R | A | -2.2326 | |
| 172 | T | A | -1.1717 |