| Chain sequence(s) |
A: MLGPLPLNPEPLPRHTDDYVEPTDLLCVAETDLLTETGHPDKDIVVNGKVLVPQVSAYQWRVFLLKLPDPNKMPLPSPDFVDPSTERLIWRLLALEIHVFGPLGKGTYGHANFNRLGDVTNPTAYLQPTANDNVAYSFRPKRLQEYIVGCEPPLGKYVTKAPPCPGLPPGACPPLVVKTSRIEHGDVCDIGYGAKDYKELDPSKNNVPDIILDTSCKVPDYDAMKAEPYGLRMFDHDRLEQSEDVKKYVLSGPDLHPLPSAGPPSPLYVPPSPDSPFAIPPPTNYFTIPDQGEITEADELFNRPRFFEETEGLNNGVCWHNRLYITVVDNTRDEIETLTTQISTPAINVYDSSNYVTSKRYTRQYKLSLILQLCRIPLTPDVLEELSRLDPSFLVEAELPFVPPVERPDPLAGLKFREIDLTNKLSTELESYPLGRAYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.6192 | |
| 2 | L | A | 2.0289 | |
| 3 | G | A | 0.7965 | |
| 4 | P | A | 0.9579 | |
| 5 | L | A | 1.6622 | |
| 6 | P | A | 0.4638 | |
| 7 | L | A | 0.9351 | |
| 8 | N | A | -1.0338 | |
| 9 | P | A | -1.1217 | |
| 10 | E | A | -1.8704 | |
| 11 | P | A | -0.7309 | |
| 12 | L | A | 0.7173 | |
| 13 | P | A | 0.0615 | |
| 14 | R | A | -0.7605 | |
| 15 | H | A | -1.1046 | |
| 16 | T | A | 0.0000 | |
| 17 | D | A | -2.8803 | |
| 18 | D | A | -2.8317 | |
| 19 | Y | A | 0.0000 | |
| 20 | V | A | 0.0000 | |
| 21 | E | A | -2.3162 | |
| 22 | P | A | -1.6543 | |
| 23 | T | A | 0.0000 | |
| 24 | D | A | -1.6770 | |
| 25 | L | A | -0.6195 | |
| 26 | L | A | -0.4175 | |
| 27 | C | A | 0.0000 | |
| 28 | V | A | 0.0000 | |
| 29 | A | A | 0.0000 | |
| 30 | E | A | -0.6731 | |
| 31 | T | A | 0.0000 | |
| 32 | D | A | -1.3850 | |
| 33 | L | A | 0.2248 | |
| 34 | L | A | 0.0018 | |
| 35 | T | A | -0.0967 | |
| 36 | E | A | -0.3843 | |
| 37 | T | A | -0.3674 | |
| 38 | G | A | 0.0000 | |
| 39 | H | A | -1.1132 | |
| 40 | P | A | 0.0000 | |
| 41 | D | A | -1.4169 | |
| 42 | K | A | -1.7042 | |
| 43 | D | A | -0.5227 | |
| 44 | I | A | 1.3548 | |
| 45 | V | A | 2.2573 | |
| 46 | V | A | 1.6221 | |
| 47 | N | A | -0.5567 | |
| 48 | G | A | -0.3929 | |
| 49 | K | A | -0.1291 | |
| 50 | V | A | 2.0203 | |
| 51 | L | A | 2.5252 | |
| 52 | V | A | 1.2735 | |
| 53 | P | A | 0.0760 | |
| 54 | Q | A | -0.9032 | |
| 55 | V | A | 0.0000 | |
| 56 | S | A | 0.0000 | |
| 57 | A | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | Q | A | 0.0000 | |
| 60 | W | A | 0.0000 | |
| 61 | R | A | 0.0000 | |
| 62 | V | A | 0.0000 | |
| 63 | F | A | 0.0000 | |
| 64 | L | A | 0.0000 | |
| 65 | L | A | 0.0000 | |
| 66 | K | A | -2.1237 | |
| 67 | L | A | 0.0000 | |
| 68 | P | A | 0.0000 | |
| 69 | D | A | -1.5697 | |
| 70 | P | A | 0.0000 | |
| 71 | N | A | -1.9917 | |
| 72 | K | A | -2.2031 | |
| 73 | M | A | -1.0437 | |
| 74 | P | A | -0.5135 | |
| 75 | L | A | -0.2960 | |
| 76 | P | A | -0.2882 | |
| 77 | S | A | -0.6977 | |
| 78 | P | A | -1.2334 | |
| 79 | D | A | -2.1177 | |
| 80 | F | A | -1.0636 | |
| 81 | V | A | 0.0000 | |
| 82 | D | A | -2.1252 | |
| 83 | P | A | -1.4960 | |
| 84 | S | A | -0.9197 | |
| 85 | T | A | -0.8611 | |
| 86 | E | A | -1.2165 | |
| 87 | R | A | -1.1064 | |
| 88 | L | A | 0.0000 | |
| 89 | I | A | 0.0000 | |
| 90 | W | A | 0.0000 | |
| 91 | R | A | -0.3298 | |
| 92 | L | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | E | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | H | A | -0.4897 | |
| 99 | V | A | 0.0000 | |
| 100 | F | A | 0.5373 | |
| 101 | G | A | -0.3169 | |
| 102 | P | A | -0.3587 | |
| 103 | L | A | -0.2882 | |
| 104 | G | A | -0.6978 | |
| 105 | K | A | -1.3093 | |
| 106 | G | A | 0.0000 | |
| 107 | T | A | -0.6228 | |
| 108 | Y | A | 0.0000 | |
| 109 | G | A | -0.5693 | |
| 110 | H | A | -0.8817 | |
| 111 | A | A | -0.6376 | |
| 112 | N | A | -1.8301 | |
| 113 | F | A | 0.0000 | |
| 114 | N | A | -1.2516 | |
| 115 | R | A | -0.6360 | |
| 116 | L | A | -0.3627 | |
| 117 | G | A | 0.0000 | |
| 118 | D | A | -0.9195 | |
| 119 | V | A | -0.4951 | |
| 120 | T | A | -1.0855 | |
| 121 | N | A | -1.6765 | |
| 122 | P | A | -0.7321 | |
| 123 | T | A | -0.3818 | |
| 124 | A | A | -0.0680 | |
| 125 | Y | A | 0.4866 | |
| 126 | L | A | 0.3538 | |
| 127 | Q | A | -0.3241 | |
| 128 | P | A | -0.5981 | |
| 129 | T | A | -0.8246 | |
| 130 | A | A | -0.7595 | |
| 131 | N | A | -1.6728 | |
| 132 | D | A | -1.3262 | |
| 133 | N | A | -1.2644 | |
| 134 | V | A | -0.3331 | |
| 135 | A | A | -0.1986 | |
| 136 | Y | A | -0.1450 | |
| 137 | S | A | -0.2872 | |
| 138 | F | A | 0.0000 | |
| 139 | R | A | -0.8100 | |
| 140 | P | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | R | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | Q | A | 0.0000 | |
| 145 | E | A | 0.0000 | |
| 146 | Y | A | 0.0000 | |
| 147 | I | A | 0.0000 | |
| 148 | V | A | 0.0000 | |
| 149 | G | A | 0.0000 | |
| 150 | C | A | 0.0000 | |
| 151 | E | A | -0.6486 | |
| 152 | P | A | 0.0000 | |
| 153 | P | A | 0.0000 | |
| 154 | L | A | -0.4244 | |
| 155 | G | A | 0.0000 | |
| 156 | K | A | -0.6450 | |
| 157 | Y | A | 0.0000 | |
| 158 | V | A | 0.6058 | |
| 159 | T | A | -0.2421 | |
| 160 | K | A | -0.6216 | |
| 161 | A | A | 0.4129 | |
| 162 | P | A | -0.1142 | |
| 163 | P | A | 0.1739 | |
| 164 | C | A | 0.5315 | |
| 165 | P | A | 0.0259 | |
| 166 | G | A | -0.0782 | |
| 167 | L | A | 0.5854 | |
| 168 | P | A | -0.1236 | |
| 169 | P | A | -0.3480 | |
| 170 | G | A | -0.0942 | |
| 171 | A | A | 0.4643 | |
| 172 | C | A | 0.9992 | |
| 173 | P | A | 0.4152 | |
| 174 | P | A | 0.8454 | |
| 175 | L | A | 1.9263 | |
| 176 | V | A | 1.9670 | |
| 177 | V | A | 1.6394 | |
| 178 | K | A | -0.4625 | |
| 179 | T | A | -0.4823 | |
| 180 | S | A | -0.7108 | |
| 181 | R | A | -0.7114 | |
| 182 | I | A | 0.0000 | |
| 183 | E | A | -1.0460 | |
| 184 | H | A | -1.1794 | |
| 185 | G | A | -0.7789 | |
| 186 | D | A | -0.7454 | |
| 187 | V | A | 0.0000 | |
| 188 | C | A | 0.0000 | |
| 189 | D | A | 0.0000 | |
| 190 | I | A | 0.0000 | |
| 191 | G | A | -0.6721 | |
| 192 | Y | A | -0.1311 | |
| 193 | G | A | -0.2636 | |
| 194 | A | A | -0.2200 | |
| 195 | K | A | -0.9444 | |
| 196 | D | A | -1.7992 | |
| 197 | Y | A | 0.0000 | |
| 198 | K | A | -3.5952 | |
| 199 | E | A | -2.8477 | |
| 200 | L | A | -1.4711 | |
| 201 | D | A | 0.0000 | |
| 202 | P | A | -1.8062 | |
| 203 | S | A | -1.4263 | |
| 204 | K | A | -2.7386 | |
| 205 | N | A | -1.7982 | |
| 206 | N | A | -1.2441 | |
| 207 | V | A | 0.0000 | |
| 208 | P | A | 0.0000 | |
| 209 | D | A | -1.4348 | |
| 210 | I | A | 0.0000 | |
| 211 | I | A | 0.0000 | |
| 212 | L | A | -1.7304 | |
| 213 | D | A | -2.8713 | |
| 214 | T | A | -1.6835 | |
| 215 | S | A | -1.2490 | |
| 216 | C | A | 0.0000 | |
| 217 | K | A | 0.0000 | |
| 218 | V | A | -0.0366 | |
| 219 | P | A | 0.0000 | |
| 220 | D | A | -1.1473 | |
| 221 | Y | A | -1.3605 | |
| 222 | D | A | -2.3518 | |
| 223 | A | A | -1.5440 | |
| 224 | M | A | 0.0000 | |
| 225 | K | A | -2.7556 | |
| 226 | A | A | -1.4897 | |
| 227 | E | A | -1.1895 | |
| 228 | P | A | -0.4392 | |
| 229 | Y | A | -0.4856 | |
| 230 | G | A | 0.0000 | |
| 231 | L | A | -0.4759 | |
| 232 | R | A | -0.6071 | |
| 233 | M | A | 0.0000 | |
| 234 | F | A | 0.0000 | |
| 235 | D | A | -1.3541 | |
| 236 | H | A | -1.0863 | |
| 237 | D | A | -1.1435 | |
| 238 | R | A | -1.3436 | |
| 239 | L | A | -1.0176 | |
| 240 | E | A | -1.3518 | |
| 241 | Q | A | -1.5293 | |
| 242 | S | A | -1.5424 | |
| 243 | E | A | -2.1636 | |
| 244 | D | A | -2.0386 | |
| 245 | V | A | -0.2695 | |
| 246 | K | A | -1.4706 | |
| 247 | K | A | -1.5430 | |
| 248 | Y | A | 0.0000 | |
| 249 | V | A | 0.0000 | |
| 250 | L | A | -0.1274 | |
| 251 | S | A | -0.6604 | |
| 252 | G | A | -0.5093 | |
| 253 | P | A | -0.3696 | |
| 254 | D | A | -0.1148 | |
| 255 | L | A | 0.8221 | |
| 256 | H | A | -0.4227 | |
| 257 | P | A | -0.0508 | |
| 258 | L | A | 0.9118 | |
| 259 | P | A | 0.3000 | |
| 260 | S | A | 0.7816 | |
| 261 | A | A | 0.1280 | |
| 262 | G | A | -0.3644 | |
| 263 | P | A | -0.2681 | |
| 264 | P | A | 0.3998 | |
| 265 | S | A | 0.5464 | |
| 266 | P | A | 0.7361 | |
| 267 | L | A | 1.8351 | |
| 268 | Y | A | 1.7684 | |
| 269 | V | A | 1.9320 | |
| 270 | P | A | 1.0325 | |
| 271 | P | A | 0.4939 | |
| 272 | S | A | -0.5259 | |
| 273 | P | A | -0.7957 | |
| 274 | D | A | -1.8147 | |
| 275 | S | A | -0.3573 | |
| 276 | P | A | 0.3255 | |
| 277 | F | A | 1.6617 | |
| 278 | A | A | 1.0162 | |
| 279 | I | A | 2.2969 | |
| 280 | P | A | 1.3661 | |
| 281 | P | A | 0.4876 | |
| 282 | P | A | 0.0000 | |
| 283 | T | A | -0.0209 | |
| 284 | N | A | -0.2467 | |
| 285 | Y | A | 0.7279 | |
| 286 | F | A | -0.0310 | |
| 287 | T | A | -0.6310 | |
| 288 | I | A | 0.0000 | |
| 289 | P | A | 0.0000 | |
| 290 | D | A | 0.0000 | |
| 291 | Q | A | 0.0000 | |
| 292 | G | A | 0.0000 | |
| 293 | E | A | -1.9977 | |
| 294 | I | A | -1.3247 | |
| 295 | T | A | -1.5068 | |
| 296 | E | A | -2.0556 | |
| 297 | A | A | -1.3588 | |
| 298 | D | A | -1.5394 | |
| 299 | E | A | -1.3929 | |
| 300 | L | A | -1.0728 | |
| 301 | F | A | 0.0000 | |
| 302 | N | A | -1.4483 | |
| 303 | R | A | -2.1664 | |
| 304 | P | A | -1.1840 | |
| 305 | R | A | -0.8702 | |
| 306 | F | A | -0.7288 | |
| 307 | F | A | 0.0000 | |
| 308 | E | A | -2.6370 | |
| 309 | E | A | -3.2332 | |
| 310 | T | A | 0.0000 | |
| 311 | E | A | -2.5737 | |
| 312 | G | A | -1.5230 | |
| 313 | L | A | -0.8808 | |
| 314 | N | A | 0.0000 | |
| 315 | N | A | 0.0000 | |
| 316 | G | A | 0.0000 | |
| 317 | V | A | 0.0000 | |
| 318 | C | A | 0.0000 | |
| 319 | W | A | 0.0000 | |
| 320 | H | A | -1.1202 | |
| 321 | N | A | -1.0043 | |
| 322 | R | A | -1.3562 | |
| 323 | L | A | 0.0000 | |
| 324 | Y | A | 0.0000 | |
| 325 | I | A | 0.0000 | |
| 326 | T | A | 0.0000 | |
| 327 | V | A | 0.0000 | |
| 328 | V | A | 0.0000 | |
| 329 | D | A | 0.0000 | |
| 330 | N | A | 0.0000 | |
| 331 | T | A | 0.0000 | |
| 332 | R | A | 0.0000 | |
| 333 | D | A | 0.0000 | |
| 334 | E | A | -1.7429 | |
| 335 | I | A | -1.1964 | |
| 336 | E | A | -1.4312 | |
| 337 | T | A | -0.6199 | |
| 338 | L | A | 0.6378 | |
| 339 | T | A | 0.8137 | |
| 340 | T | A | 0.9876 | |
| 341 | Q | A | 0.8455 | |
| 342 | I | A | 2.0177 | |
| 343 | S | A | 0.6183 | |
| 344 | T | A | 0.0922 | |
| 345 | P | A | -0.1750 | |
| 346 | A | A | -0.0231 | |
| 347 | I | A | 0.3831 | |
| 348 | N | A | -0.0279 | |
| 349 | V | A | 1.6217 | |
| 350 | Y | A | 1.3337 | |
| 351 | D | A | -0.4334 | |
| 352 | S | A | -0.1948 | |
| 353 | S | A | -0.0158 | |
| 354 | N | A | 0.6076 | |
| 355 | Y | A | 1.3146 | |
| 356 | V | A | 2.1772 | |
| 357 | T | A | 1.0003 | |
| 358 | S | A | -0.1034 | |
| 359 | K | A | -1.1687 | |
| 360 | R | A | -1.1844 | |
| 361 | Y | A | 0.0000 | |
| 362 | T | A | -0.6091 | |
| 363 | R | A | 0.0000 | |
| 364 | Q | A | 0.0077 | |
| 365 | Y | A | 0.0000 | |
| 366 | K | A | -0.4668 | |
| 367 | L | A | 0.0000 | |
| 368 | S | A | 0.0000 | |
| 369 | L | A | 0.0000 | |
| 370 | I | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | Q | A | -0.4747 | |
| 373 | L | A | 0.0000 | |
| 374 | C | A | 0.0000 | |
| 375 | R | A | -1.3545 | |
| 376 | I | A | 0.0000 | |
| 377 | P | A | -0.8766 | |
| 378 | L | A | -0.5673 | |
| 379 | T | A | -0.7908 | |
| 380 | P | A | -1.3351 | |
| 381 | D | A | -2.0755 | |
| 382 | V | A | 0.0000 | |
| 383 | L | A | -1.2944 | |
| 384 | E | A | -2.4813 | |
| 385 | E | A | 0.0000 | |
| 386 | L | A | 0.0000 | |
| 387 | S | A | -1.0899 | |
| 388 | R | A | -1.2905 | |
| 389 | L | A | -0.7430 | |
| 390 | D | A | -0.7773 | |
| 391 | P | A | -0.8442 | |
| 392 | S | A | -0.8135 | |
| 393 | F | A | 0.0000 | |
| 394 | L | A | -0.7205 | |
| 395 | V | A | -0.9659 | |
| 396 | E | A | -2.0802 | |
| 397 | A | A | -1.8068 | |
| 398 | E | A | -2.0583 | |
| 399 | L | A | 0.0000 | |
| 400 | P | A | 0.2796 | |
| 401 | F | A | 1.6691 | |
| 402 | V | A | 0.7993 | |
| 403 | P | A | 0.3271 | |
| 404 | P | A | -0.2911 | |
| 405 | V | A | 0.2820 | |
| 406 | E | A | -1.7813 | |
| 407 | R | A | -2.0333 | |
| 408 | P | A | -1.6543 | |
| 409 | D | A | -1.8806 | |
| 410 | P | A | -0.9686 | |
| 411 | L | A | -0.6488 | |
| 412 | A | A | -0.7062 | |
| 413 | G | A | -0.7619 | |
| 414 | L | A | -0.7305 | |
| 415 | K | A | -2.0269 | |
| 416 | F | A | -1.3868 | |
| 417 | R | A | -1.7028 | |
| 418 | E | A | -2.7107 | |
| 419 | I | A | 0.0000 | |
| 420 | D | A | -2.9016 | |
| 421 | L | A | 0.0000 | |
| 422 | T | A | -1.5449 | |
| 423 | N | A | -1.7767 | |
| 424 | K | A | -1.5751 | |
| 425 | L | A | -0.6141 | |
| 426 | S | A | -0.7919 | |
| 427 | T | A | -1.0629 | |
| 428 | E | A | -2.4855 | |
| 429 | L | A | 0.0000 | |
| 430 | E | A | -2.7475 | |
| 431 | S | A | -1.7910 | |
| 432 | Y | A | -1.1628 | |
| 433 | P | A | -0.8837 | |
| 434 | L | A | 0.0000 | |
| 435 | G | A | 0.0000 | |
| 436 | R | A | -2.1441 | |
| 437 | A | A | -1.4010 | |
| 438 | Y | A | -0.7393 | |
| 439 | L | A | -0.6113 | |
| 440 | N | A | -2.0126 | |
| 441 | R | A | -2.0947 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine