Chain sequence(s) |
H: QVQLVQSGSELKKPGASVKVSCKASGYTFTDNNMDWVRQAPGQGLEWMGDINTRSGGSIYNEEFQDRVIMTVDKSTDTAYMELSSLRSEDTATYHCARRKSYGYYLDEWGEGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCKASRNIERQLAWYQQKPGQAPELLIYQASRKESGVPDRFSGSRYGTDFTLTISSLQPEDIATYYCQQYSDPPLTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12) [INFO] Main: Simulation completed successfully. (00:01:13) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.4097 | |
2 | V | H | -1.0583 | |
3 | Q | H | -1.3260 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.0675 | |
6 | Q | H | -0.4712 | |
7 | S | H | -0.7275 | |
8 | G | H | -0.7640 | |
9 | S | H | -0.2500 | |
11 | E | H | -0.2546 | |
12 | L | H | 0.6784 | |
13 | K | H | -0.9869 | |
14 | K | H | -2.1572 | |
15 | P | H | -2.1272 | |
16 | G | H | -1.5147 | |
17 | A | H | -1.1924 | |
18 | S | H | -1.2570 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.7915 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.5008 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.8282 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.8424 | |
27 | G | H | -0.8982 | |
28 | Y | H | -0.7068 | |
29 | T | H | -0.7467 | |
30 | F | H | 0.0000 | |
35 | T | H | -2.0879 | |
36 | D | H | -2.4699 | |
37 | N | H | -1.5836 | |
38 | N | H | -1.3674 | |
39 | M | H | 0.0000 | |
40 | D | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.7456 | |
45 | A | H | -1.0861 | |
46 | P | H | -1.0439 | |
47 | G | H | -1.2200 | |
48 | Q | H | -1.7502 | |
49 | G | H | -1.1260 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.6999 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | D | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | N | H | -1.5608 | |
58 | T | H | 0.0000 | |
59 | R | H | -2.8363 | |
62 | S | H | -1.4914 | |
63 | G | H | -1.4277 | |
64 | G | H | -0.9536 | |
65 | S | H | 0.0797 | |
66 | I | H | 0.1257 | |
67 | Y | H | -0.7018 | |
68 | N | H | 0.0000 | |
69 | E | H | -3.4896 | |
70 | E | H | -3.3409 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.7966 | |
74 | D | H | -2.8217 | |
75 | R | H | 0.0000 | |
76 | V | H | 0.0000 | |
77 | I | H | 0.5918 | |
78 | M | H | 0.0000 | |
79 | T | H | -0.1257 | |
80 | V | H | -0.9803 | |
81 | D | H | -1.3692 | |
82 | K | H | -2.0837 | |
83 | S | H | -1.1519 | |
84 | T | H | -1.1533 | |
85 | D | H | -1.6156 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.1572 | |
89 | M | H | 0.0000 | |
90 | E | H | -0.7213 | |
91 | L | H | 0.0000 | |
92 | S | H | -0.8877 | |
93 | S | H | -1.2068 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.5813 | |
96 | S | H | -2.1344 | |
97 | E | H | -2.4036 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.8151 | |
100 | A | H | 0.0000 | |
101 | T | H | -0.2606 | |
102 | Y | H | 0.0000 | |
103 | H | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.7636 | |
107 | R | H | -0.7514 | |
108 | K | H | -0.5923 | |
109 | S | H | -0.1265 | |
110 | Y | H | 1.0365 | |
112 | G | H | 0.3715 | |
113 | Y | H | 0.1635 | |
114 | Y | H | 0.0000 | |
115 | L | H | 0.0000 | |
116 | D | H | -0.9507 | |
117 | E | H | -1.3477 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | E | H | -2.1236 | |
121 | G | H | -1.0848 | |
122 | T | H | 0.0000 | |
123 | L | H | 0.1530 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.3274 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.9934 | |
128 | S | H | -0.8704 | |
1 | D | L | -2.6349 | |
2 | I | L | 0.0000 | |
3 | Q | L | -2.2224 | |
4 | M | L | 0.0000 | |
5 | T | L | -1.2135 | |
6 | Q | L | -0.9872 | |
7 | S | L | -0.7339 | |
8 | P | L | -0.5120 | |
9 | S | L | -0.6693 | |
10 | S | L | -0.7957 | |
11 | L | L | -0.6435 | |
12 | S | L | -1.0113 | |
13 | A | L | -1.0672 | |
14 | S | L | -0.8567 | |
15 | V | L | 0.1631 | |
16 | G | L | -0.8137 | |
17 | D | L | -1.8296 | |
18 | R | L | -2.3305 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.6549 | |
21 | I | L | 0.0000 | |
22 | T | L | -0.6909 | |
23 | C | L | 0.0000 | |
24 | K | L | -2.2785 | |
25 | A | L | 0.0000 | |
26 | S | L | -2.1485 | |
27 | R | L | -2.9623 | |
28 | N | L | -3.0191 | |
29 | I | L | 0.0000 | |
36 | E | L | -2.9262 | |
37 | R | L | -2.4702 | |
38 | Q | L | -1.7840 | |
39 | L | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | -1.0225 | |
45 | K | L | -1.3639 | |
46 | P | L | -0.9374 | |
47 | G | L | -1.5370 | |
48 | Q | L | -2.2572 | |
49 | A | L | -1.7461 | |
50 | P | L | 0.0000 | |
51 | E | L | -1.5598 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -1.0813 | |
56 | Q | L | -1.6992 | |
57 | A | L | 0.0000 | |
65 | S | L | -1.5719 | |
66 | R | L | -2.3133 | |
67 | K | L | -1.9424 | |
68 | E | L | -1.2487 | |
69 | S | L | -0.8671 | |
70 | G | L | -0.8533 | |
71 | V | L | -0.8718 | |
72 | P | L | -1.2032 | |
74 | D | L | -2.1093 | |
75 | R | L | -1.5090 | |
76 | F | L | 0.0000 | |
77 | S | L | -1.1179 | |
78 | G | L | -0.8679 | |
79 | S | L | -0.7554 | |
80 | R | L | -0.8218 | |
83 | Y | L | 0.2369 | |
84 | G | L | -1.0813 | |
85 | T | L | -1.7885 | |
86 | D | L | -1.1294 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.4172 | |
89 | L | L | 0.0000 | |
90 | T | L | 0.0000 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.6436 | |
93 | S | L | -1.3687 | |
94 | L | L | 0.0000 | |
95 | Q | L | -0.6390 | |
96 | P | L | -0.9733 | |
97 | E | L | -1.6989 | |
98 | D | L | 0.0000 | |
99 | I | L | -0.1876 | |
100 | A | L | 0.0000 | |
101 | T | L | -0.5998 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | Y | L | 0.0000 | |
108 | S | L | -1.4155 | |
109 | D | L | -1.3080 | |
114 | P | L | -1.0719 | |
115 | P | L | -1.2411 | |
116 | L | L | 0.0000 | |
117 | T | L | -0.7940 | |
118 | F | L | -0.2845 | |
119 | G | L | 0.0000 | |
120 | G | L | -1.0519 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.1192 | |
124 | V | L | 0.0000 | |
125 | E | L | -1.1563 | |
126 | I | L | -0.7598 | |
127 | K | L | -1.5897 |