Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASGRTFSPYTWFRQAPGQGLEAVAIIGSDRSTDLDGDTRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAALTAKGYVFTDNEYDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40) [INFO] Main: Simulation completed successfully. (00:00:40) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.8578 | |
2 | V | A | -1.7329 | |
3 | Q | A | -1.3025 | |
4 | L | A | 0.0000 | |
5 | V | A | 1.2198 | |
6 | E | A | 0.0000 | |
7 | S | A | -0.1337 | |
8 | G | A | -0.6118 | |
9 | G | A | 0.1490 | |
10 | G | A | 0.6848 | |
11 | L | A | 1.3879 | |
12 | V | A | -0.0761 | |
13 | Q | A | -1.3909 | |
14 | P | A | -1.7440 | |
15 | G | A | -1.5200 | |
16 | G | A | -1.0473 | |
17 | S | A | -1.4841 | |
18 | L | A | -1.0863 | |
19 | R | A | -2.3351 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.4591 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.1599 | |
24 | A | A | 0.0000 | |
25 | S | A | -1.3928 | |
26 | G | A | -1.9982 | |
27 | R | A | -2.3000 | |
28 | T | A | -1.3041 | |
29 | F | A | -0.4924 | |
30 | S | A | -0.3016 | |
31 | P | A | -0.2684 | |
32 | Y | A | 0.0000 | |
33 | T | A | 0.0000 | |
34 | W | A | 0.0000 | |
35 | F | A | 0.0000 | |
36 | R | A | -0.2833 | |
37 | Q | A | -0.5602 | |
38 | A | A | -0.9499 | |
39 | P | A | -1.1715 | |
40 | G | A | -1.2046 | |
41 | Q | A | -1.7190 | |
42 | G | A | -0.9550 | |
43 | L | A | 0.1319 | |
44 | E | A | -0.7402 | |
45 | A | A | -0.3450 | |
46 | V | A | 0.0000 | |
47 | A | A | 0.0000 | |
48 | I | A | 0.0000 | |
49 | I | A | -1.0969 | |
50 | G | A | -1.3793 | |
51 | S | A | -1.6476 | |
52 | D | A | -2.8215 | |
53 | R | A | -2.8386 | |
54 | S | A | -1.6408 | |
55 | T | A | -0.9247 | |
56 | D | A | -1.1044 | |
57 | L | A | -0.3054 | |
58 | D | A | -1.0911 | |
59 | G | A | -1.0139 | |
60 | D | A | -0.9517 | |
61 | T | A | -0.8374 | |
62 | R | A | -1.1686 | |
63 | F | A | 0.0000 | |
64 | T | A | -0.9686 | |
65 | I | A | 0.0000 | |
66 | S | A | -0.9852 | |
67 | R | A | -1.7069 | |
68 | D | A | -2.2976 | |
69 | N | A | -2.5778 | |
70 | S | A | -2.0429 | |
71 | K | A | -2.7039 | |
72 | N | A | -2.1695 | |
73 | T | A | 0.0000 | |
74 | L | A | 0.0000 | |
75 | Y | A | -0.9018 | |
76 | L | A | 0.0000 | |
77 | Q | A | -1.7130 | |
78 | M | A | 0.0000 | |
79 | N | A | -1.9669 | |
80 | S | A | -1.4394 | |
81 | L | A | 0.0000 | |
82 | R | A | -2.6039 | |
83 | A | A | -1.8605 | |
84 | E | A | -2.3386 | |
85 | D | A | 0.0000 | |
86 | T | A | -0.4700 | |
87 | A | A | 0.0000 | |
88 | V | A | 0.8069 | |
89 | Y | A | 0.0000 | |
90 | Y | A | 0.4484 | |
91 | C | A | 0.0000 | |
92 | A | A | 0.0000 | |
93 | A | A | 0.0000 | |
94 | L | A | -1.0762 | |
95 | T | A | -1.0908 | |
96 | A | A | -1.0898 | |
97 | K | A | -1.1445 | |
98 | G | A | 0.1562 | |
99 | Y | A | 1.7331 | |
100 | V | A | 1.6401 | |
101 | F | A | 1.7987 | |
102 | T | A | -0.1107 | |
103 | D | A | -2.2188 | |
104 | N | A | -2.7785 | |
105 | E | A | -2.7688 | |
106 | Y | A | -1.7641 | |
107 | D | A | -1.8125 | |
108 | Y | A | -0.6052 | |
109 | W | A | 0.2184 | |
110 | G | A | 0.0866 | |
111 | Q | A | -0.5800 | |
112 | G | A | 0.1745 | |
113 | T | A | 0.6426 | |
114 | L | A | 1.5821 | |
115 | V | A | 0.0000 | |
116 | T | A | 0.3363 | |
117 | V | A | 0.0000 | |
118 | S | A | -0.7558 | |
119 | S | A | -0.5095 |