| Chain sequence(s) |
H: DVQLQESGGGSVQAGGSLRLSCAASGNPYSHYWLGWFRQTPGKEREGVAVIYTGDGDGTTYYTDSVKGRFTVSQDNGKNTLYLQMNNLKPEDTAMYYCALRGNDGSWFSPLQPGHYTYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | H | -2.3782 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -2.0526 | |
| 4 | L | H | -1.3915 | |
| 5 | Q | H | -1.6641 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.9976 | |
| 8 | G | H | -0.9471 | |
| 9 | G | H | -0.8682 | |
| 11 | G | H | -0.6785 | |
| 12 | S | H | -0.5827 | |
| 13 | V | H | -0.7520 | |
| 14 | Q | H | -1.7635 | |
| 15 | A | H | -1.9072 | |
| 16 | G | H | -1.8688 | |
| 17 | G | H | -1.4141 | |
| 18 | S | H | -1.3348 | |
| 19 | L | H | -0.8637 | |
| 20 | R | H | -1.4343 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.6866 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.9638 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.7549 | |
| 27 | G | H | -1.8122 | |
| 28 | N | H | -1.8639 | |
| 29 | P | H | -1.3634 | |
| 30 | Y | H | -0.3704 | |
| 35 | S | H | -1.0154 | |
| 36 | H | H | -1.6176 | |
| 37 | Y | H | 0.0000 | |
| 38 | W | H | 0.0000 | |
| 39 | L | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.7061 | |
| 45 | T | H | -1.5300 | |
| 46 | P | H | -1.1127 | |
| 47 | G | H | -1.4754 | |
| 48 | K | H | -2.2638 | |
| 49 | E | H | -2.8951 | |
| 50 | R | H | -2.1872 | |
| 51 | E | H | -1.5734 | |
| 52 | G | H | -0.7398 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.4706 | |
| 58 | T | H | -1.3432 | |
| 59 | G | H | -2.2184 | |
| 60 | D | H | -2.7822 | |
| 61 | G | H | -2.3443 | |
| 62 | D | H | -2.5648 | |
| 63 | G | H | -1.4417 | |
| 64 | T | H | -0.4368 | |
| 65 | T | H | 0.2596 | |
| 66 | Y | H | 0.6357 | |
| 67 | Y | H | -0.3867 | |
| 68 | T | H | -1.2137 | |
| 69 | D | H | -2.4053 | |
| 70 | S | H | -1.8852 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5096 | |
| 74 | G | H | -1.8884 | |
| 75 | R | H | -2.0277 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6407 | |
| 78 | V | H | 0.0000 | |
| 79 | S | H | -0.5395 | |
| 80 | Q | H | -1.4262 | |
| 81 | D | H | -2.0547 | |
| 82 | N | H | -2.5641 | |
| 83 | G | H | -2.1790 | |
| 84 | K | H | -2.7343 | |
| 85 | N | H | -2.0689 | |
| 86 | T | H | -1.4505 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4231 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.9497 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.7525 | |
| 93 | N | H | -2.3121 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.6992 | |
| 96 | P | H | -1.9120 | |
| 97 | E | H | -2.3527 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -1.0942 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | -0.4583 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | -0.4377 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | L | H | 0.0000 | |
| 107 | R | H | 0.0000 | |
| 108 | G | H | -1.5384 | |
| 109 | N | H | -2.2149 | |
| 110 | D | H | -2.4026 | |
| 111 | G | H | -0.8473 | |
| 111A | S | H | -0.0554 | |
| 111B | W | H | 0.9827 | |
| 111C | F | H | 1.0917 | |
| 112D | S | H | 0.4151 | |
| 112C | P | H | 0.0000 | |
| 112B | L | H | -0.1966 | |
| 112A | Q | H | -1.4690 | |
| 112 | P | H | -1.2634 | |
| 113 | G | H | -1.2119 | |
| 114 | H | H | -1.7120 | |
| 115 | Y | H | 0.0000 | |
| 116 | T | H | -0.6956 | |
| 117 | Y | H | -0.3343 | |
| 118 | W | H | -0.1696 | |
| 119 | G | H | -0.9306 | |
| 120 | Q | H | -1.3698 | |
| 121 | G | H | -0.8892 | |
| 122 | T | H | -0.8500 | |
| 123 | Q | H | -0.8440 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.8652 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.2133 | |
| 128 | S | H | -0.9272 |