| Chain sequence(s) |
A: NMAAPPNMANMAAPPCMNMAAPNNMANMAAPNCMNMAAPAPENMAAPPNMANMAAPPCMNMAAPNNMANMAAPNCMNMAAPAPE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:29)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -0.7628 | |
| 2 | M | A | 0.4812 | |
| 3 | A | A | 0.2099 | |
| 4 | A | A | -0.1429 | |
| 5 | P | A | -0.3203 | |
| 6 | P | A | -1.1533 | |
| 7 | N | A | -1.2460 | |
| 8 | M | A | 0.2996 | |
| 9 | A | A | -0.5102 | |
| 10 | N | A | -1.1756 | |
| 11 | M | A | 0.3897 | |
| 12 | A | A | 0.0072 | |
| 13 | A | A | -0.2904 | |
| 14 | P | A | 0.1570 | |
| 15 | P | A | 0.2327 | |
| 16 | C | A | 1.0127 | |
| 17 | M | A | 1.3019 | |
| 18 | N | A | 0.3158 | |
| 19 | M | A | 1.2187 | |
| 20 | A | A | 0.3949 | |
| 21 | A | A | -0.3361 | |
| 22 | P | A | -1.1169 | |
| 23 | N | A | -2.7087 | |
| 24 | N | A | -2.4170 | |
| 25 | M | A | 0.0816 | |
| 26 | A | A | 0.0000 | |
| 27 | N | A | -0.2329 | |
| 28 | M | A | 1.2636 | |
| 29 | A | A | 0.5642 | |
| 30 | A | A | -0.0274 | |
| 31 | P | A | -0.6654 | |
| 32 | N | A | -1.0880 | |
| 33 | C | A | -0.2396 | |
| 34 | M | A | -0.4695 | |
| 35 | N | A | -0.8782 | |
| 36 | M | A | -0.0412 | |
| 37 | A | A | -0.1718 | |
| 38 | A | A | -0.2062 | |
| 39 | P | A | -0.5116 | |
| 40 | A | A | -0.6690 | |
| 41 | P | A | -1.2614 | |
| 42 | E | A | -2.2498 | |
| 43 | N | A | -1.6504 | |
| 44 | M | A | -0.0381 | |
| 45 | A | A | -0.1962 | |
| 46 | A | A | -0.3763 | |
| 47 | P | A | -0.6121 | |
| 48 | P | A | -1.1425 | |
| 49 | N | A | -2.1432 | |
| 50 | M | A | -1.2590 | |
| 51 | A | A | -1.1471 | |
| 52 | N | A | -1.7967 | |
| 53 | M | A | 0.0000 | |
| 54 | A | A | -0.3808 | |
| 55 | A | A | -0.3557 | |
| 56 | P | A | 0.1140 | |
| 57 | P | A | 0.3268 | |
| 58 | C | A | 0.9365 | |
| 59 | M | A | 1.1297 | |
| 60 | N | A | -0.2878 | |
| 61 | M | A | 0.7208 | |
| 62 | A | A | -0.0936 | |
| 63 | A | A | -0.8113 | |
| 64 | P | A | -1.4866 | |
| 65 | N | A | -2.8852 | |
| 66 | N | A | -2.6479 | |
| 67 | M | A | -0.4757 | |
| 68 | A | A | -0.7777 | |
| 69 | N | A | -1.0933 | |
| 70 | M | A | 0.8735 | |
| 71 | A | A | 0.0000 | |
| 72 | A | A | -0.5380 | |
| 73 | P | A | -0.5732 | |
| 74 | N | A | -0.8377 | |
| 75 | C | A | 0.0387 | |
| 76 | M | A | 0.8099 | |
| 77 | N | A | 0.3742 | |
| 78 | M | A | 1.1070 | |
| 79 | A | A | 0.5093 | |
| 80 | A | A | 0.1811 | |
| 81 | P | A | -0.3662 | |
| 82 | A | A | -0.6524 | |
| 83 | P | A | -1.2555 | |
| 84 | E | A | -1.9674 |