Project name: query_structure

Status: done

Started: 2026-03-17 00:17:08
Settings
Chain sequence(s) A: NMAAPPNMANMAAPPCMNMAAPNNMANMAAPNCMNMAAPAPENMAAPPNMANMAAPPCMNMAAPNNMANMAAPNCMNMAAPAPE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:30)
Show buried residues

Minimal score value
-2.8852
Maximal score value
1.3019
Average score
-0.401
Total score value
-33.6876

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -0.7628
2 M A 0.4812
3 A A 0.2099
4 A A -0.1429
5 P A -0.3203
6 P A -1.1533
7 N A -1.2460
8 M A 0.2996
9 A A -0.5102
10 N A -1.1756
11 M A 0.3897
12 A A 0.0072
13 A A -0.2904
14 P A 0.1570
15 P A 0.2327
16 C A 1.0127
17 M A 1.3019
18 N A 0.3158
19 M A 1.2187
20 A A 0.3949
21 A A -0.3361
22 P A -1.1169
23 N A -2.7087
24 N A -2.4170
25 M A 0.0816
26 A A 0.0000
27 N A -0.2329
28 M A 1.2636
29 A A 0.5642
30 A A -0.0274
31 P A -0.6654
32 N A -1.0880
33 C A -0.2396
34 M A -0.4695
35 N A -0.8782
36 M A -0.0412
37 A A -0.1718
38 A A -0.2062
39 P A -0.5116
40 A A -0.6690
41 P A -1.2614
42 E A -2.2498
43 N A -1.6504
44 M A -0.0381
45 A A -0.1962
46 A A -0.3763
47 P A -0.6121
48 P A -1.1425
49 N A -2.1432
50 M A -1.2590
51 A A -1.1471
52 N A -1.7967
53 M A 0.0000
54 A A -0.3808
55 A A -0.3557
56 P A 0.1140
57 P A 0.3268
58 C A 0.9365
59 M A 1.1297
60 N A -0.2878
61 M A 0.7208
62 A A -0.0936
63 A A -0.8113
64 P A -1.4866
65 N A -2.8852
66 N A -2.6479
67 M A -0.4757
68 A A -0.7777
69 N A -1.0933
70 M A 0.8735
71 A A 0.0000
72 A A -0.5380
73 P A -0.5732
74 N A -0.8377
75 C A 0.0387
76 M A 0.8099
77 N A 0.3742
78 M A 1.1070
79 A A 0.5093
80 A A 0.1811
81 P A -0.3662
82 A A -0.6524
83 P A -1.2555
84 E A -1.9674
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Laboratory of Theory of Biopolymers 2018