| Chain sequence(s) |
A: PVLTQSPSVSAAPRQRVTISVSGSNSNIGSNTVNWIQQLPGRAPELLMYDDDLLAPGVSDRFSGSRSGTSASLTISGLQSEDEADYYAATWDDSLNGWVFGGGTKVTVL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | P | A | 0.6009 | |
| 3 | V | A | 1.7268 | |
| 4 | L | A | 0.0000 | |
| 5 | T | A | 0.0509 | |
| 6 | Q | A | 0.0000 | |
| 7 | S | A | -0.6818 | |
| 8 | P | A | -0.9183 | |
| 9 | S | A | -0.8638 | |
| 11 | V | A | -0.2706 | |
| 12 | S | A | -0.0022 | |
| 13 | A | A | -0.4035 | |
| 14 | A | A | -0.4987 | |
| 15 | P | A | -1.6351 | |
| 16 | R | A | -3.0807 | |
| 17 | Q | A | -3.1315 | |
| 18 | R | A | -2.9842 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.5148 | |
| 21 | I | A | 0.0000 | |
| 22 | S | A | -0.3804 | |
| 23 | V | A | 0.0000 | |
| 24 | S | A | -0.3606 | |
| 25 | G | A | -0.3824 | |
| 26 | S | A | -0.9571 | |
| 27 | N | A | -1.9502 | |
| 28 | S | A | -1.4171 | |
| 29 | N | A | 0.0000 | |
| 30 | I | A | 0.0000 | |
| 35 | G | A | -1.3907 | |
| 36 | S | A | -1.1254 | |
| 37 | N | A | -1.0340 | |
| 38 | T | A | -1.1434 | |
| 39 | V | A | 0.0000 | |
| 40 | N | A | -0.2198 | |
| 41 | W | A | 0.0000 | |
| 42 | I | A | -0.0993 | |
| 43 | Q | A | -1.0847 | |
| 44 | Q | A | -1.5858 | |
| 45 | L | A | -1.7011 | |
| 46 | P | A | -1.5355 | |
| 47 | G | A | -1.4688 | |
| 48 | R | A | -2.4363 | |
| 49 | A | A | -1.5714 | |
| 50 | P | A | -1.5723 | |
| 51 | E | A | -1.8769 | |
| 52 | L | A | -0.2174 | |
| 53 | L | A | 0.0000 | |
| 54 | M | A | 0.0000 | |
| 55 | Y | A | -0.4235 | |
| 56 | D | A | -1.9892 | |
| 57 | D | A | -1.7996 | |
| 65 | D | A | -1.8740 | |
| 66 | L | A | -0.0944 | |
| 67 | L | A | 0.0705 | |
| 68 | A | A | 0.0000 | |
| 69 | P | A | -0.0388 | |
| 70 | G | A | -0.5986 | |
| 71 | V | A | -0.3651 | |
| 72 | S | A | -1.0308 | |
| 74 | D | A | -1.8430 | |
| 75 | R | A | -1.6041 | |
| 76 | F | A | 0.0000 | |
| 77 | S | A | -0.9816 | |
| 78 | G | A | -1.1040 | |
| 79 | S | A | -1.3109 | |
| 80 | R | A | -1.5654 | |
| 83 | S | A | -0.8626 | |
| 84 | G | A | -1.1357 | |
| 85 | T | A | -1.1352 | |
| 86 | S | A | -0.8788 | |
| 87 | A | A | 0.0000 | |
| 88 | S | A | -0.6901 | |
| 89 | L | A | 0.0000 | |
| 90 | T | A | -0.6809 | |
| 91 | I | A | 0.0000 | |
| 92 | S | A | -2.1222 | |
| 93 | G | A | -2.2028 | |
| 94 | L | A | 0.0000 | |
| 95 | Q | A | -1.8267 | |
| 96 | S | A | -1.3719 | |
| 97 | E | A | -2.2489 | |
| 98 | D | A | 0.0000 | |
| 99 | E | A | -1.4415 | |
| 100 | A | A | 0.0000 | |
| 101 | D | A | -1.1448 | |
| 102 | Y | A | 0.0000 | |
| 103 | Y | A | 0.1006 | |
| 104 | A | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | T | A | 0.0000 | |
| 107 | W | A | 0.5298 | |
| 108 | D | A | 0.0000 | |
| 109 | D | A | -1.8828 | |
| 110 | S | A | -0.8207 | |
| 113 | L | A | 0.6880 | |
| 114 | N | A | -0.9755 | |
| 115 | G | A | 0.1197 | |
| 116 | W | A | 1.5523 | |
| 117 | V | A | 0.0000 | |
| 118 | F | A | 1.6906 | |
| 119 | G | A | 0.0000 | |
| 120 | G | A | -0.2968 | |
| 121 | G | A | 0.0000 | |
| 122 | T | A | 0.0000 | |
| 123 | K | A | -1.8643 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | -0.2491 | |
| 126 | V | A | -0.1982 | |
| 127 | L | A | 1.3970 |