Chain sequence(s) |
A: PVLTQSPSVSAAPRQRVTISVSGSNSNIGSNTVNWIQQLPGRAPELLMYDDDLLAPGVSDRFSGSRSGTSASLTISGLQSEDEADYYAATWDDSLNGWVFGGGTKVTVL
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37) [INFO] Main: Simulation completed successfully. (00:00:38) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
2 | P | A | 0.6009 | |
3 | V | A | 1.7268 | |
4 | L | A | 0.0000 | |
5 | T | A | 0.0509 | |
6 | Q | A | 0.0000 | |
7 | S | A | -0.6818 | |
8 | P | A | -0.9183 | |
9 | S | A | -0.8638 | |
11 | V | A | -0.2706 | |
12 | S | A | -0.0022 | |
13 | A | A | -0.4035 | |
14 | A | A | -0.4987 | |
15 | P | A | -1.6351 | |
16 | R | A | -3.0807 | |
17 | Q | A | -3.1315 | |
18 | R | A | -2.9842 | |
19 | V | A | 0.0000 | |
20 | T | A | -0.5148 | |
21 | I | A | 0.0000 | |
22 | S | A | -0.3804 | |
23 | V | A | 0.0000 | |
24 | S | A | -0.3606 | |
25 | G | A | -0.3824 | |
26 | S | A | -0.9571 | |
27 | N | A | -1.9502 | |
28 | S | A | -1.4171 | |
29 | N | A | 0.0000 | |
30 | I | A | 0.0000 | |
35 | G | A | -1.3907 | |
36 | S | A | -1.1254 | |
37 | N | A | -1.0340 | |
38 | T | A | -1.1434 | |
39 | V | A | 0.0000 | |
40 | N | A | -0.2198 | |
41 | W | A | 0.0000 | |
42 | I | A | -0.0993 | |
43 | Q | A | -1.0847 | |
44 | Q | A | -1.5858 | |
45 | L | A | -1.7011 | |
46 | P | A | -1.5355 | |
47 | G | A | -1.4688 | |
48 | R | A | -2.4363 | |
49 | A | A | -1.5714 | |
50 | P | A | -1.5723 | |
51 | E | A | -1.8769 | |
52 | L | A | -0.2174 | |
53 | L | A | 0.0000 | |
54 | M | A | 0.0000 | |
55 | Y | A | -0.4235 | |
56 | D | A | -1.9892 | |
57 | D | A | -1.7996 | |
65 | D | A | -1.8740 | |
66 | L | A | -0.0944 | |
67 | L | A | 0.0705 | |
68 | A | A | 0.0000 | |
69 | P | A | -0.0388 | |
70 | G | A | -0.5986 | |
71 | V | A | -0.3651 | |
72 | S | A | -1.0308 | |
74 | D | A | -1.8430 | |
75 | R | A | -1.6041 | |
76 | F | A | 0.0000 | |
77 | S | A | -0.9816 | |
78 | G | A | -1.1040 | |
79 | S | A | -1.3109 | |
80 | R | A | -1.5654 | |
83 | S | A | -0.8626 | |
84 | G | A | -1.1357 | |
85 | T | A | -1.1352 | |
86 | S | A | -0.8788 | |
87 | A | A | 0.0000 | |
88 | S | A | -0.6901 | |
89 | L | A | 0.0000 | |
90 | T | A | -0.6809 | |
91 | I | A | 0.0000 | |
92 | S | A | -2.1222 | |
93 | G | A | -2.2028 | |
94 | L | A | 0.0000 | |
95 | Q | A | -1.8267 | |
96 | S | A | -1.3719 | |
97 | E | A | -2.2489 | |
98 | D | A | 0.0000 | |
99 | E | A | -1.4415 | |
100 | A | A | 0.0000 | |
101 | D | A | -1.1448 | |
102 | Y | A | 0.0000 | |
103 | Y | A | 0.1006 | |
104 | A | A | 0.0000 | |
105 | A | A | 0.0000 | |
106 | T | A | 0.0000 | |
107 | W | A | 0.5298 | |
108 | D | A | 0.0000 | |
109 | D | A | -1.8828 | |
110 | S | A | -0.8207 | |
113 | L | A | 0.6880 | |
114 | N | A | -0.9755 | |
115 | G | A | 0.1197 | |
116 | W | A | 1.5523 | |
117 | V | A | 0.0000 | |
118 | F | A | 1.6906 | |
119 | G | A | 0.0000 | |
120 | G | A | -0.2968 | |
121 | G | A | 0.0000 | |
122 | T | A | 0.0000 | |
123 | K | A | -1.8643 | |
124 | V | A | 0.0000 | |
125 | T | A | -0.2491 | |
126 | V | A | -0.1982 | |
127 | L | A | 1.3970 |