Project name: query_structure

Status: done

Started: 2026-03-16 23:49:31
Settings
Chain sequence(s) A: IPPLAVINPLAVIAPNMVAV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:04)
Show buried residues

Minimal score value
0.4223
Maximal score value
3.0272
Average score
1.8868
Total score value
37.7366

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 2.4228
2 P A 1.5876
3 P A 1.4203
4 L A 2.4385
5 A A 2.4581
6 V A 3.0272
7 I A 2.6732
8 N A 1.1797
9 P A 1.5429
10 L A 2.1968
11 A A 1.8719
12 V A 2.1906
13 I A 1.6676
14 A A 1.3440
15 P A 0.9106
16 N A 0.4223
17 M A 1.9588
18 V A 2.4752
19 A A 1.6224
20 V A 2.3261
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Laboratory of Theory of Biopolymers 2018