| Chain sequence(s) |
H: EVQLQQSGPELVKPGASVKISCKASGYTFTDYYMNWVKQSHGKSLEWIGDIYPKNGGTNYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSVVYYCAKTGDWTVGYFDVWGTGTTVTVSS
L: QIVLTQSPAIMSASPGEKVTITCSASSSVIYTNWFQQKPGTSPKVWIYRTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSHPPTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:02)
[INFO] Main: Simulation completed successfully. (00:02:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9628 | |
| 2 | V | H | -1.2120 | |
| 3 | Q | H | -1.9802 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.0355 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -1.0793 | |
| 8 | G | H | -0.7405 | |
| 9 | P | H | -0.3234 | |
| 11 | E | H | -0.3026 | |
| 12 | L | H | 0.8994 | |
| 13 | V | H | -0.2090 | |
| 14 | K | H | -1.7107 | |
| 15 | P | H | -1.4464 | |
| 16 | G | H | -1.2544 | |
| 17 | A | H | -1.0225 | |
| 18 | S | H | -1.2616 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.9461 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.9648 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -2.0430 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.3269 | |
| 27 | G | H | -1.0608 | |
| 28 | Y | H | -0.4998 | |
| 29 | T | H | -0.2842 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.4716 | |
| 36 | D | H | -1.0547 | |
| 37 | Y | H | 0.0307 | |
| 38 | Y | H | 0.2710 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | S | H | -1.5441 | |
| 46 | H | H | -1.9139 | |
| 47 | G | H | -1.8032 | |
| 48 | K | H | -2.3271 | |
| 49 | S | H | -1.2616 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0878 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | D | H | -0.4229 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.9084 | |
| 58 | P | H | 0.0000 | |
| 59 | K | H | -2.7158 | |
| 62 | N | H | -2.3767 | |
| 63 | G | H | -1.5537 | |
| 64 | G | H | -1.2042 | |
| 65 | T | H | -0.8015 | |
| 66 | N | H | -1.5048 | |
| 67 | Y | H | -1.6075 | |
| 68 | N | H | -2.1893 | |
| 69 | Q | H | -2.9946 | |
| 70 | K | H | -2.9478 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.9679 | |
| 74 | G | H | -1.9266 | |
| 75 | K | H | -1.7448 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.9245 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3852 | |
| 80 | V | H | -0.8949 | |
| 81 | D | H | -1.2590 | |
| 82 | K | H | -2.0818 | |
| 83 | S | H | -1.0172 | |
| 84 | S | H | -0.9643 | |
| 85 | S | H | -1.1226 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.4677 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.1930 | |
| 91 | L | H | 0.0000 | |
| 92 | R | H | -1.3356 | |
| 93 | S | H | -1.1045 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2678 | |
| 96 | S | H | -1.4541 | |
| 97 | E | H | -2.0823 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.6849 | |
| 100 | V | H | 0.0000 | |
| 101 | V | H | -0.0200 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | T | H | 0.0000 | |
| 108 | G | H | -0.1308 | |
| 109 | D | H | -0.0497 | |
| 110 | W | H | 0.9350 | |
| 111 | T | H | 0.4513 | |
| 112 | V | H | 0.1543 | |
| 113 | G | H | -0.0616 | |
| 114 | Y | H | -0.1133 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -1.0501 | |
| 117 | V | H | -0.6461 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | T | H | -0.6070 | |
| 121 | G | H | -0.3607 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.1212 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1547 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6192 | |
| 128 | S | H | -0.7522 | |
| 1 | Q | L | -1.2002 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 1.2248 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | 0.2246 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.0240 | |
| 8 | P | L | 0.2658 | |
| 9 | A | L | 0.5645 | |
| 10 | I | L | 1.1920 | |
| 11 | M | L | 0.1679 | |
| 12 | S | L | -0.9223 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -1.8642 | |
| 15 | P | L | -1.8270 | |
| 16 | G | L | -2.2107 | |
| 17 | E | L | -2.9124 | |
| 18 | K | L | -2.9463 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6268 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.2472 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.1938 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | 0.0073 | |
| 27 | S | L | -0.2954 | |
| 28 | S | L | -0.0245 | |
| 29 | V | L | 0.0000 | |
| 37 | I | L | 1.8434 | |
| 38 | Y | L | 0.9639 | |
| 39 | T | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.1476 | |
| 45 | K | L | -1.4287 | |
| 46 | P | L | -0.8349 | |
| 47 | G | L | -0.7921 | |
| 48 | T | L | -0.8352 | |
| 49 | S | L | -0.7324 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.9124 | |
| 52 | V | L | 0.0000 | |
| 53 | W | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.5002 | |
| 56 | R | L | -0.7188 | |
| 57 | T | L | -0.4193 | |
| 65 | S | L | -0.9010 | |
| 66 | N | L | -1.2114 | |
| 67 | L | L | -0.2637 | |
| 68 | A | L | -0.5133 | |
| 69 | S | L | -0.4929 | |
| 70 | G | L | -0.4152 | |
| 71 | V | L | -0.3411 | |
| 72 | P | L | -0.1040 | |
| 74 | A | L | -0.0722 | |
| 75 | R | L | -1.0891 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4454 | |
| 78 | G | L | -0.6052 | |
| 79 | S | L | -0.7062 | |
| 80 | G | L | -0.3612 | |
| 83 | S | L | -0.0727 | |
| 84 | G | L | 0.0562 | |
| 85 | T | L | -0.2201 | |
| 86 | S | L | -0.6100 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.3494 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.8052 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -2.1612 | |
| 93 | R | L | -3.3140 | |
| 94 | M | L | 0.0000 | |
| 95 | E | L | -2.4406 | |
| 96 | A | L | -1.7105 | |
| 97 | E | L | -2.2918 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.4728 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.7847 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | R | L | -0.3060 | |
| 108 | S | L | 0.1861 | |
| 109 | S | L | -0.7496 | |
| 114 | H | L | -1.6695 | |
| 115 | P | L | -1.6618 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.3940 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.1025 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.6235 | |
| 126 | L | L | -1.4115 | |
| 127 | K | L | -1.9405 |