Project name: 15.37E11

Status: done

Started: 2026-07-07 08:30:29
Settings
Chain sequence(s) H: EVQLQQSGPELVKPGASVKISCKASGYTFTDYYMNWVKQSHGKSLEWIGDIYPKNGGTNYNQKFKGKATLTVDKSSSTAYMELRSLTSEDSVVYYCAKTGDWTVGYFDVWGTGTTVTVSS
L: QIVLTQSPAIMSASPGEKVTITCSASSSVIYTNWFQQKPGTSPKVWIYRTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSHPPTFGAGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:03)
Show buried residues

Minimal score value
-3.314
Maximal score value
1.8434
Average score
-0.6094
Total score value
-137.715

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9628
2 V H -1.2120
3 Q H -1.9802
4 L H 0.0000
5 Q H -2.0355
6 Q H 0.0000
7 S H -1.0793
8 G H -0.7405
9 P H -0.3234
11 E H -0.3026
12 L H 0.8994
13 V H -0.2090
14 K H -1.7107
15 P H -1.4464
16 G H -1.2544
17 A H -1.0225
18 S H -1.2616
19 V H 0.0000
20 K H -1.9461
21 I H 0.0000
22 S H -0.9648
23 C H 0.0000
24 K H -2.0430
25 A H 0.0000
26 S H -1.3269
27 G H -1.0608
28 Y H -0.4998
29 T H -0.2842
30 F H 0.0000
35 T H -1.4716
36 D H -1.0547
37 Y H 0.0307
38 Y H 0.2710
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H 0.0000
45 S H -1.5441
46 H H -1.9139
47 G H -1.8032
48 K H -2.3271
49 S H -1.2616
50 L H 0.0000
51 E H -1.0878
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 D H -0.4229
56 I H 0.0000
57 Y H -0.9084
58 P H 0.0000
59 K H -2.7158
62 N H -2.3767
63 G H -1.5537
64 G H -1.2042
65 T H -0.8015
66 N H -1.5048
67 Y H -1.6075
68 N H -2.1893
69 Q H -2.9946
70 K H -2.9478
71 F H 0.0000
72 K H -2.9679
74 G H -1.9266
75 K H -1.7448
76 A H 0.0000
77 T H -0.9245
78 L H 0.0000
79 T H -0.3852
80 V H -0.8949
81 D H -1.2590
82 K H -2.0818
83 S H -1.0172
84 S H -0.9643
85 S H -1.1226
86 T H 0.0000
87 A H 0.0000
88 Y H -0.4677
89 M H 0.0000
90 E H -1.1930
91 L H 0.0000
92 R H -1.3356
93 S H -1.1045
94 L H 0.0000
95 T H -1.2678
96 S H -1.4541
97 E H -2.0823
98 D H 0.0000
99 S H -0.6849
100 V H 0.0000
101 V H -0.0200
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 T H 0.0000
108 G H -0.1308
109 D H -0.0497
110 W H 0.9350
111 T H 0.4513
112 V H 0.1543
113 G H -0.0616
114 Y H -0.1133
115 F H 0.0000
116 D H -1.0501
117 V H -0.6461
118 W H 0.0000
119 G H 0.0000
120 T H -0.6070
121 G H -0.3607
122 T H 0.0000
123 T H -0.1212
124 V H 0.0000
125 T H -0.1547
126 V H 0.0000
127 S H -0.6192
128 S H -0.7522
1 Q L -1.2002
2 I L 0.0000
3 V L 1.2248
4 L L 0.0000
5 T L 0.2246
6 Q L 0.0000
7 S L -0.0240
8 P L 0.2658
9 A L 0.5645
10 I L 1.1920
11 M L 0.1679
12 S L -0.9223
13 A L 0.0000
14 S L -1.8642
15 P L -1.8270
16 G L -2.2107
17 E L -2.9124
18 K L -2.9463
19 V L 0.0000
20 T L -0.6268
21 I L 0.0000
22 T L -0.2472
23 C L 0.0000
24 S L -0.1938
25 A L 0.0000
26 S L 0.0073
27 S L -0.2954
28 S L -0.0245
29 V L 0.0000
37 I L 1.8434
38 Y L 0.9639
39 T L 0.0000
40 N L 0.0000
41 W L 0.0000
42 F L 0.0000
43 Q L 0.0000
44 Q L -1.1476
45 K L -1.4287
46 P L -0.8349
47 G L -0.7921
48 T L -0.8352
49 S L -0.7324
50 P L 0.0000
51 K L -1.9124
52 V L 0.0000
53 W L 0.0000
54 I L 0.0000
55 Y L -0.5002
56 R L -0.7188
57 T L -0.4193
65 S L -0.9010
66 N L -1.2114
67 L L -0.2637
68 A L -0.5133
69 S L -0.4929
70 G L -0.4152
71 V L -0.3411
72 P L -0.1040
74 A L -0.0722
75 R L -1.0891
76 F L 0.0000
77 S L -0.4454
78 G L -0.6052
79 S L -0.7062
80 G L -0.3612
83 S L -0.0727
84 G L 0.0562
85 T L -0.2201
86 S L -0.6100
87 Y L 0.0000
88 S L -0.3494
89 L L 0.0000
90 T L -0.8052
91 I L 0.0000
92 S L -2.1612
93 R L -3.3140
94 M L 0.0000
95 E L -2.4406
96 A L -1.7105
97 E L -2.2918
98 D L 0.0000
99 A L -1.4728
100 A L 0.0000
101 T L -0.7847
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 R L -0.3060
108 S L 0.1861
109 S L -0.7496
114 H L -1.6695
115 P L -1.6618
116 P L 0.0000
117 T L 0.0000
118 F L 0.0000
119 G L 0.0000
120 A L -0.3940
121 G L 0.0000
122 T L 0.0000
123 K L -1.1025
124 L L 0.0000
125 E L -1.6235
126 L L -1.4115
127 K L -1.9405
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Laboratory of Theory of Biopolymers 2018