| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWAFQWHIFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVGRHYTVYDSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:55)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.3999 | |
| 2 | P | A | 0.2592 | |
| 3 | A | A | 0.1336 | |
| 4 | P | A | -0.8645 | |
| 5 | K | A | -1.9994 | |
| 6 | N | A | -1.1434 | |
| 7 | L | A | 0.3207 | |
| 8 | V | A | 1.7201 | |
| 9 | V | A | 0.9612 | |
| 10 | S | A | -0.5522 | |
| 11 | R | A | -2.0154 | |
| 12 | V | A | -1.0164 | |
| 13 | T | A | -1.7623 | |
| 14 | E | A | -3.0032 | |
| 15 | D | A | -2.6738 | |
| 16 | S | A | -2.0573 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.1358 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.0271 | |
| 21 | W | A | 0.0000 | |
| 22 | A | A | -0.7226 | |
| 23 | F | A | -0.6205 | |
| 24 | Q | A | -1.1577 | |
| 25 | W | A | 0.1310 | |
| 26 | H | A | -0.5621 | |
| 27 | I | A | -0.1942 | |
| 28 | F | A | 0.0000 | |
| 29 | D | A | -2.3724 | |
| 30 | S | A | -1.0639 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | 0.6832 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | 0.4360 | |
| 35 | Y | A | 0.3028 | |
| 36 | Q | A | -1.0349 | |
| 37 | E | A | -2.1624 | |
| 38 | S | A | -1.6961 | |
| 39 | E | A | -2.8331 | |
| 40 | K | A | -2.4791 | |
| 41 | V | A | -0.1272 | |
| 42 | G | A | -1.1006 | |
| 43 | E | A | -1.5605 | |
| 44 | A | A | -0.3746 | |
| 45 | I | A | 0.7979 | |
| 46 | V | A | 1.5951 | |
| 47 | L | A | 1.1908 | |
| 48 | T | A | 0.3732 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.2856 | |
| 51 | G | A | -1.4201 | |
| 52 | S | A | -1.3034 | |
| 53 | E | A | -1.9012 | |
| 54 | R | A | -1.4929 | |
| 55 | S | A | -0.8661 | |
| 56 | Y | A | -0.8697 | |
| 57 | D | A | -1.7216 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.3505 | |
| 60 | G | A | -1.6194 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -3.0250 | |
| 63 | P | A | -2.5276 | |
| 64 | G | A | -1.8513 | |
| 65 | T | A | -2.5349 | |
| 66 | E | A | -2.2136 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | -0.0944 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | -0.0224 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | -0.2622 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | R | A | -2.2554 | |
| 77 | H | A | -1.3879 | |
| 78 | Y | A | 0.2133 | |
| 79 | T | A | -0.0192 | |
| 80 | V | A | 0.4483 | |
| 81 | Y | A | 0.0021 | |
| 82 | D | A | -1.7902 | |
| 83 | S | A | -1.3885 | |
| 84 | N | A | -1.8432 | |
| 85 | P | A | -1.0486 | |
| 86 | L | A | 0.0000 | |
| 87 | S | A | 0.1369 | |
| 88 | A | A | 1.3945 | |
| 89 | I | A | 1.8184 | |
| 90 | F | A | 0.0000 | |
| 91 | T | A | -0.8704 | |
| 92 | T | A | -1.9438 |