| Chain sequence(s) |
A: MKKTAIAIAVALAGFATVAQAAVDNKFNKEAIFASIEIINLPNLNGHQVHAFIRSLSDDPSQSANLLAEAKKLNDAQAPKGQAGQHHHHHHGAYPYDVPDYAS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:58)
[INFO] Main: Simulation completed successfully. (00:00:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.1745 | |
| 2 | K | A | -2.0845 | |
| 3 | K | A | -2.1509 | |
| 4 | T | A | -0.7176 | |
| 5 | A | A | 0.5867 | |
| 6 | I | A | 2.4078 | |
| 7 | A | A | 2.2781 | |
| 8 | I | A | 3.1783 | |
| 9 | A | A | 2.3776 | |
| 10 | V | A | 2.7923 | |
| 11 | A | A | 1.8742 | |
| 12 | L | A | 2.3621 | |
| 13 | A | A | 1.3777 | |
| 14 | G | A | 1.2586 | |
| 15 | F | A | 2.4581 | |
| 16 | A | A | 1.3109 | |
| 17 | T | A | 0.9896 | |
| 18 | V | A | 1.8483 | |
| 19 | A | A | 0.6105 | |
| 20 | Q | A | -0.7871 | |
| 21 | A | A | -0.6232 | |
| 22 | A | A | -0.8139 | |
| 23 | V | A | -0.9642 | |
| 24 | D | A | -2.2303 | |
| 25 | N | A | -3.1855 | |
| 26 | K | A | -3.2751 | |
| 27 | F | A | -1.7998 | |
| 28 | N | A | -2.3138 | |
| 29 | K | A | -1.9800 | |
| 30 | E | A | -1.7367 | |
| 31 | A | A | 0.0000 | |
| 32 | I | A | 1.8277 | |
| 33 | F | A | 1.8277 | |
| 34 | A | A | 0.0000 | |
| 35 | S | A | 1.3706 | |
| 36 | I | A | 2.2316 | |
| 37 | E | A | 0.4441 | |
| 38 | I | A | 0.0000 | |
| 39 | I | A | 1.2907 | |
| 40 | N | A | -0.2565 | |
| 41 | L | A | -0.5636 | |
| 42 | P | A | -0.8880 | |
| 43 | N | A | -1.2391 | |
| 44 | L | A | 0.0000 | |
| 45 | N | A | -1.7841 | |
| 46 | G | A | -1.5380 | |
| 47 | H | A | -1.9108 | |
| 48 | Q | A | -1.2935 | |
| 49 | V | A | -0.9032 | |
| 50 | H | A | -1.6295 | |
| 51 | A | A | -1.3054 | |
| 52 | F | A | 0.0000 | |
| 53 | I | A | -0.4483 | |
| 54 | R | A | -2.5503 | |
| 55 | S | A | -1.9232 | |
| 56 | L | A | 0.0000 | |
| 57 | S | A | -1.8530 | |
| 58 | D | A | -2.7966 | |
| 59 | D | A | -2.1136 | |
| 60 | P | A | -2.0605 | |
| 61 | S | A | -1.7478 | |
| 62 | Q | A | -1.6499 | |
| 63 | S | A | 0.0000 | |
| 64 | A | A | -0.9912 | |
| 65 | N | A | -1.7930 | |
| 66 | L | A | -1.5110 | |
| 67 | L | A | -1.0070 | |
| 68 | A | A | -1.8413 | |
| 69 | E | A | -3.0054 | |
| 70 | A | A | 0.0000 | |
| 71 | K | A | -2.9355 | |
| 72 | K | A | -3.3013 | |
| 73 | L | A | -2.0327 | |
| 74 | N | A | 0.0000 | |
| 75 | D | A | -3.1644 | |
| 76 | A | A | -1.8937 | |
| 77 | Q | A | -1.9528 | |
| 78 | A | A | -1.8887 | |
| 79 | P | A | -1.8277 | |
| 80 | K | A | -2.6996 | |
| 81 | G | A | -2.0180 | |
| 82 | Q | A | -2.3428 | |
| 83 | A | A | -1.8516 | |
| 84 | G | A | -1.9417 | |
| 85 | Q | A | -2.4677 | |
| 86 | H | A | -2.5550 | |
| 87 | H | A | -2.7369 | |
| 88 | H | A | -2.7754 | |
| 89 | H | A | -2.8356 | |
| 90 | H | A | -2.5062 | |
| 91 | H | A | -1.8908 | |
| 92 | G | A | -1.0202 | |
| 93 | A | A | 0.1944 | |
| 94 | Y | A | 1.0637 | |
| 95 | P | A | 0.7222 | |
| 96 | Y | A | 1.3667 | |
| 97 | D | A | -0.5517 | |
| 98 | V | A | 0.6821 | |
| 99 | P | A | -0.1569 | |
| 100 | D | A | -1.0200 | |
| 101 | Y | A | 0.6055 | |
| 102 | A | A | -0.0454 | |
| 103 | S | A | -0.0645 |