| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIIDGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAPLHPGPDDRVDFSWDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFHVRSGPVGHPLPDAPPPSPLYVRPPPGSPYAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCVPEPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9428 | |
| 2 | L | A | 1.9718 | |
| 3 | P | A | 0.8388 | |
| 4 | P | A | 0.3900 | |
| 5 | T | A | 0.1058 | |
| 6 | T | A | 0.1479 | |
| 7 | P | A | 0.1952 | |
| 8 | V | A | 1.1797 | |
| 9 | A | A | 0.0380 | |
| 10 | K | A | -1.1379 | |
| 11 | V | A | -0.3734 | |
| 12 | Q | A | -1.5187 | |
| 13 | S | A | -1.6357 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.5765 | |
| 16 | E | A | -2.5447 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4402 | |
| 20 | P | A | 0.0436 | |
| 21 | T | A | 0.1063 | |
| 22 | S | A | -0.1784 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0916 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2355 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7318 | |
| 31 | R | A | -2.6942 | |
| 32 | L | A | -0.8481 | |
| 33 | L | A | 1.0542 | |
| 34 | T | A | 1.3637 | |
| 35 | V | A | 1.8985 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2467 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5666 | |
| 40 | K | A | -1.6496 | |
| 41 | D | A | -0.2770 | |
| 42 | I | A | 1.6420 | |
| 43 | I | A | 2.7062 | |
| 44 | I | A | 2.0096 | |
| 45 | D | A | -0.7721 | |
| 46 | G | A | -0.4015 | |
| 47 | K | A | -0.0145 | |
| 48 | V | A | 2.4131 | |
| 49 | L | A | 2.7343 | |
| 50 | V | A | 1.7746 | |
| 51 | P | A | 0.4683 | |
| 52 | K | A | -0.5267 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.2254 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4627 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3391 | |
| 70 | K | A | -1.8708 | |
| 71 | F | A | -0.9239 | |
| 72 | A | A | -0.6041 | |
| 73 | L | A | -0.9381 | |
| 74 | P | A | -1.2537 | |
| 75 | Q | A | -2.4748 | |
| 76 | K | A | -3.0901 | |
| 77 | D | A | -2.9725 | |
| 78 | F | A | -1.6305 | |
| 79 | Y | A | -1.8965 | |
| 80 | D | A | -2.6949 | |
| 81 | P | A | -2.3156 | |
| 82 | E | A | -3.0277 | |
| 83 | K | A | -3.3796 | |
| 84 | E | A | -2.4448 | |
| 85 | R | A | -1.2809 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6383 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0353 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.4168 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.8305 | |
| 99 | G | A | -0.6532 | |
| 100 | P | A | -0.4394 | |
| 101 | L | A | -0.0361 | |
| 102 | G | A | -0.4591 | |
| 103 | K | A | -0.8021 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.5552 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.2085 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.4055 | |
| 110 | L | A | -0.2110 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2468 | |
| 113 | K | A | -0.3549 | |
| 114 | L | A | -0.7932 | |
| 115 | G | A | -0.6228 | |
| 116 | D | A | -1.1175 | |
| 117 | T | A | -0.9303 | |
| 118 | E | A | -2.1788 | |
| 119 | N | A | -2.0076 | |
| 120 | P | A | -1.3077 | |
| 121 | T | A | -0.7852 | |
| 122 | A | A | -0.7862 | |
| 123 | P | A | -0.5326 | |
| 124 | L | A | -0.3523 | |
| 125 | H | A | -1.0642 | |
| 126 | P | A | -1.3804 | |
| 127 | G | A | -1.6104 | |
| 128 | P | A | -1.5247 | |
| 129 | D | A | -2.2400 | |
| 130 | D | A | -1.7178 | |
| 131 | R | A | -1.3129 | |
| 132 | V | A | -0.4499 | |
| 133 | D | A | -1.3071 | |
| 134 | F | A | -0.5347 | |
| 135 | S | A | -0.4636 | |
| 136 | W | A | 0.0000 | |
| 137 | D | A | -0.7856 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2136 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5582 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1941 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1093 | |
| 157 | D | A | 0.2233 | |
| 158 | L | A | 0.6728 | |
| 159 | A | A | 0.0683 | |
| 160 | E | A | -1.4773 | |
| 161 | P | A | -0.2417 | |
| 162 | C | A | 0.1885 | |
| 163 | P | A | -0.1856 | |
| 164 | G | A | -0.1159 | |
| 165 | L | A | 0.5235 | |
| 166 | P | A | -0.1667 | |
| 167 | P | A | -0.3650 | |
| 168 | G | A | -0.4360 | |
| 169 | A | A | -0.0481 | |
| 170 | C | A | 0.6305 | |
| 171 | P | A | 0.5391 | |
| 172 | P | A | 0.5820 | |
| 173 | I | A | 1.7180 | |
| 174 | Q | A | 0.6839 | |
| 175 | L | A | 1.3360 | |
| 176 | V | A | 0.7897 | |
| 177 | N | A | -0.3414 | |
| 178 | S | A | -0.0042 | |
| 179 | V | A | 0.3521 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.4679 | |
| 182 | D | A | 0.3286 | |
| 183 | G | A | -0.1328 | |
| 184 | D | A | -0.4027 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.3778 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1109 | |
| 190 | F | A | 0.0822 | |
| 191 | G | A | -0.1807 | |
| 192 | N | A | -0.2117 | |
| 193 | M | A | -0.0882 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4045 | |
| 197 | E | A | -2.7630 | |
| 198 | L | A | -1.2882 | |
| 199 | Q | A | -2.5282 | |
| 200 | Q | A | -3.2842 | |
| 201 | D | A | -3.4407 | |
| 202 | R | A | -3.2860 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1556 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3714 | |
| 211 | S | A | -1.8522 | |
| 212 | T | A | -1.3316 | |
| 213 | R | A | -1.7910 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1657 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3345 | |
| 220 | L | A | 0.5555 | |
| 221 | K | A | -1.2162 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9040 | |
| 224 | N | A | -1.6375 | |
| 225 | E | A | -1.3704 | |
| 226 | A | A | -0.6598 | |
| 227 | Y | A | -0.4158 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6367 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.0935 | |
| 234 | F | A | 0.1656 | |
| 235 | G | A | -0.7834 | |
| 236 | R | A | -2.3286 | |
| 237 | R | A | -2.7042 | |
| 238 | E | A | -1.6050 | |
| 239 | Q | A | 0.1576 | |
| 240 | V | A | 1.5172 | |
| 241 | Y | A | 0.9092 | |
| 242 | A | A | -0.0285 | |
| 243 | R | A | -1.3629 | |
| 244 | H | A | -1.0234 | |
| 245 | F | A | -0.0206 | |
| 246 | H | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.4506 | |
| 249 | S | A | -0.9256 | |
| 250 | G | A | -0.7383 | |
| 251 | P | A | -0.7309 | |
| 252 | V | A | -0.6409 | |
| 253 | G | A | -0.9434 | |
| 254 | H | A | -1.1280 | |
| 255 | P | A | -0.7303 | |
| 256 | L | A | 0.0245 | |
| 257 | P | A | -0.8638 | |
| 258 | D | A | -1.7534 | |
| 259 | A | A | -0.7228 | |
| 260 | P | A | -0.8381 | |
| 261 | P | A | -0.6775 | |
| 262 | P | A | -0.0254 | |
| 263 | S | A | -0.0237 | |
| 264 | P | A | 0.6692 | |
| 265 | L | A | 1.4991 | |
| 266 | Y | A | 1.0957 | |
| 267 | V | A | 0.8946 | |
| 268 | R | A | -1.0240 | |
| 269 | P | A | -0.1551 | |
| 270 | P | A | -0.6142 | |
| 271 | P | A | -0.7535 | |
| 272 | G | A | -0.3246 | |
| 273 | S | A | 0.0250 | |
| 274 | P | A | 0.6581 | |
| 275 | Y | A | 1.5896 | |
| 276 | A | A | 1.0865 | |
| 277 | V | A | 2.4256 | |
| 278 | L | A | 1.9018 | |
| 279 | P | A | 0.8088 | |
| 280 | P | A | 0.3803 | |
| 281 | Y | A | 0.3756 | |
| 282 | D | A | -0.2181 | |
| 283 | Y | A | 1.1581 | |
| 284 | F | A | 0.8050 | |
| 285 | G | A | 0.2405 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.6318 | |
| 291 | L | A | 1.6362 | |
| 292 | V | A | 0.5343 | |
| 293 | S | A | -0.2053 | |
| 294 | S | A | -0.8656 | |
| 295 | D | A | -1.9071 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.1416 | |
| 298 | L | A | -1.2224 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7824 | |
| 301 | R | A | -2.0943 | |
| 302 | P | A | -1.0613 | |
| 303 | F | A | -0.1490 | |
| 304 | W | A | -0.3627 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.1827 | |
| 307 | R | A | -2.9033 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7815 | |
| 310 | G | A | -1.3501 | |
| 311 | N | A | -1.3722 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8709 | |
| 319 | N | A | -0.8923 | |
| 320 | E | A | -1.0511 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4303 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2250 | |
| 333 | N | A | 0.3233 | |
| 334 | F | A | 1.4123 | |
| 335 | T | A | 0.7281 | |
| 336 | I | A | 0.4207 | |
| 337 | S | A | -0.8199 | |
| 338 | Q | A | -1.4041 | |
| 339 | Q | A | -0.8036 | |
| 340 | L | A | 1.0328 | |
| 341 | C | A | 0.9826 | |
| 342 | V | A | 1.3891 | |
| 343 | P | A | -0.1039 | |
| 344 | E | A | -1.1582 | |
| 345 | P | A | -0.3889 | |
| 346 | N | A | -0.7331 | |
| 347 | V | A | 1.3256 | |
| 348 | Y | A | 1.2954 | |
| 349 | D | A | 0.1095 | |
| 350 | P | A | -0.3119 | |
| 351 | S | A | -0.2437 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5216 | |
| 354 | K | A | -1.6738 | |
| 355 | N | A | -1.6844 | |
| 356 | Y | A | -0.1793 | |
| 357 | L | A | 0.5267 | |
| 358 | R | A | 0.8172 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1345 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.3735 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9822 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6604 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2676 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3164 | |
| 376 | L | A | -1.7130 | |
| 377 | D | A | -1.9962 | |
| 378 | P | A | -1.0721 | |
| 379 | G | A | -1.0855 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -0.5986 | |
| 382 | A | A | -0.6992 | |
| 383 | H | A | -0.8865 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4103 | |
| 386 | T | A | -0.5855 | |
| 387 | M | A | -0.3284 | |
| 388 | N | A | -0.8625 | |
| 389 | P | A | -1.2616 | |
| 390 | T | A | -1.3999 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5271 | |
| 393 | E | A | -2.7752 | |
| 394 | N | A | -2.3587 | |
| 395 | W | A | -1.5816 | |
| 396 | N | A | -1.3439 | |
| 397 | L | A | -0.2439 | |
| 398 | G | A | 0.5850 | |
| 399 | F | A | 2.3770 | |
| 400 | V | A | 1.7649 | |
| 401 | P | A | 0.0561 | |
| 402 | P | A | -1.9161 | |
| 403 | K | A | -3.2829 | |
| 404 | E | A | -3.8551 | |
| 405 | R | A | -3.9686 | |
| 406 | E | A | -3.8592 | |
| 407 | D | A | -2.9060 | |
| 408 | P | A | -1.7794 | |
| 409 | Y | A | -1.0046 | |
| 410 | K | A | -2.1269 | |
| 411 | G | A | -0.6364 | |
| 412 | L | A | 0.6757 | |
| 413 | I | A | 1.6708 | |
| 414 | F | A | 0.7204 | |
| 415 | W | A | -0.2835 | |
| 416 | E | A | -1.6437 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9709 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.1031 | |
| 421 | E | A | -2.7291 | |
| 422 | R | A | -2.3177 | |
| 423 | F | A | -1.2596 | |
| 424 | S | A | -1.5020 | |
| 425 | Q | A | -1.8580 | |
| 426 | D | A | -3.0261 | |
| 427 | L | A | 0.0000 | |
| 428 | D | A | -2.9487 | |
| 429 | Q | A | -2.6879 | |
| 430 | F | A | -1.4881 | |
| 431 | A | A | -0.9306 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.7242 | |
| 435 | K | A | -0.8704 | |
| 436 | F | A | 0.0839 | |
| 437 | L | A | 0.9261 | |
| 438 | Y | A | 0.7836 | |
| 439 | Q | A | -0.3292 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine