| Chain sequence(s) |
L: KMSLATFDYNVYHTID
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 103 | K | L | -1.5717 | |
| 104 | M | L | 0.3574 | |
| 105 | S | L | 0.2520 | |
| 106 | L | L | 1.6266 | |
| 107 | A | L | 0.3263 | |
| 108 | T | L | 0.0954 | |
| 109 | F | L | 0.8329 | |
| 110 | D | L | -0.6256 | |
| 111 | Y | L | 0.8975 | |
| 112 | N | L | -0.8717 | |
| 113 | V | L | 0.8951 | |
| 114 | Y | L | 1.3968 | |
| 115 | H | L | -0.2344 | |
| 116 | T | L | 0.2103 | |
| 117 | I | L | 1.6757 | |
| 118 | D | L | -1.4247 |