| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVVNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGTVGHPLFNKLGDTENPTAYQHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPVGHPLPSAPPPSPLYTPPPPTSPYAVLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPKNNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9510 | |
| 2 | L | A | 1.9798 | |
| 3 | P | A | 0.7101 | |
| 4 | P | A | 0.1270 | |
| 5 | T | A | 0.2084 | |
| 6 | T | A | 0.1552 | |
| 7 | P | A | 0.2588 | |
| 8 | V | A | 1.2494 | |
| 9 | A | A | 0.0552 | |
| 10 | K | A | -1.1054 | |
| 11 | V | A | -0.3267 | |
| 12 | Q | A | -1.4654 | |
| 13 | S | A | -1.6354 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.6331 | |
| 16 | E | A | -2.5668 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4318 | |
| 20 | P | A | 0.0750 | |
| 21 | T | A | 0.1014 | |
| 22 | S | A | -0.1801 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | 0.0444 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2532 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7565 | |
| 31 | R | A | -2.6938 | |
| 32 | L | A | -0.8410 | |
| 33 | L | A | 1.0898 | |
| 34 | T | A | 1.3678 | |
| 35 | V | A | 1.9076 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2641 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7162 | |
| 40 | E | A | -2.0061 | |
| 41 | D | A | -0.8425 | |
| 42 | I | A | 1.2941 | |
| 43 | V | A | 2.2504 | |
| 44 | V | A | 1.6843 | |
| 45 | N | A | -0.5373 | |
| 46 | G | A | -0.3533 | |
| 47 | K | A | -0.1161 | |
| 48 | V | A | 2.1918 | |
| 49 | V | A | 2.5125 | |
| 50 | V | A | 1.4739 | |
| 51 | P | A | 0.2794 | |
| 52 | K | A | -0.7481 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.2236 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4584 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3269 | |
| 70 | K | A | -1.8696 | |
| 71 | F | A | -0.9244 | |
| 72 | A | A | -0.5872 | |
| 73 | L | A | -0.9281 | |
| 74 | P | A | -1.2509 | |
| 75 | Q | A | -2.4794 | |
| 76 | K | A | -3.0970 | |
| 77 | D | A | -2.9936 | |
| 78 | F | A | -1.6586 | |
| 79 | Y | A | -1.9360 | |
| 80 | D | A | -2.7357 | |
| 81 | P | A | -2.3218 | |
| 82 | E | A | -3.0290 | |
| 83 | K | A | -3.3851 | |
| 84 | E | A | -2.4443 | |
| 85 | R | A | -1.2736 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.5048 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0592 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.4138 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7787 | |
| 99 | G | A | -0.6075 | |
| 100 | P | A | -0.4468 | |
| 101 | L | A | -0.0376 | |
| 102 | G | A | -0.4246 | |
| 103 | R | A | -0.7067 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4339 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1704 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4581 | |
| 110 | L | A | 0.3620 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1458 | |
| 113 | K | A | -0.4330 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3106 | |
| 117 | T | A | -1.0021 | |
| 118 | E | A | -2.3312 | |
| 119 | N | A | -2.2123 | |
| 120 | P | A | -1.4872 | |
| 121 | T | A | -0.8269 | |
| 122 | A | A | -0.4342 | |
| 123 | Y | A | -0.0771 | |
| 124 | Q | A | -1.4480 | |
| 125 | H | A | -1.7761 | |
| 126 | E | A | -2.8225 | |
| 127 | G | A | -2.3080 | |
| 128 | A | A | -1.5742 | |
| 129 | D | A | -2.4893 | |
| 130 | D | A | -2.2046 | |
| 131 | R | A | -1.1401 | |
| 132 | V | A | 0.2728 | |
| 133 | A | A | 0.4991 | |
| 134 | F | A | 0.3332 | |
| 135 | S | A | -0.1060 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7166 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.1891 | |
| 140 | Q | A | -0.1596 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5373 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2121 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0906 | |
| 157 | D | A | 0.3496 | |
| 158 | I | A | 0.7918 | |
| 159 | A | A | 0.0451 | |
| 160 | E | A | -1.4872 | |
| 161 | P | A | -0.2490 | |
| 162 | C | A | 0.1779 | |
| 163 | P | A | -0.2074 | |
| 164 | G | A | -0.1357 | |
| 165 | L | A | 0.4875 | |
| 166 | P | A | -0.1855 | |
| 167 | P | A | -0.3722 | |
| 168 | G | A | -0.4381 | |
| 169 | A | A | -0.0428 | |
| 170 | C | A | 0.7231 | |
| 171 | P | A | 0.5569 | |
| 172 | P | A | 0.6104 | |
| 173 | I | A | 1.7742 | |
| 174 | Q | A | 0.7191 | |
| 175 | L | A | 1.3288 | |
| 176 | V | A | 0.7990 | |
| 177 | N | A | -0.3076 | |
| 178 | S | A | -0.0205 | |
| 179 | V | A | 0.3190 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3731 | |
| 182 | D | A | 0.2645 | |
| 183 | G | A | -0.1795 | |
| 184 | D | A | -0.5347 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4204 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1278 | |
| 190 | F | A | 0.0915 | |
| 191 | G | A | -0.0631 | |
| 192 | N | A | -0.2549 | |
| 193 | M | A | -0.0970 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.2501 | |
| 197 | E | A | -2.4337 | |
| 198 | L | A | -1.1404 | |
| 199 | Q | A | -2.4546 | |
| 200 | Q | A | -3.2627 | |
| 201 | D | A | -3.5386 | |
| 202 | R | A | -3.2764 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1763 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3697 | |
| 211 | S | A | -1.8430 | |
| 212 | T | A | -1.3843 | |
| 213 | R | A | -1.9050 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1966 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3178 | |
| 220 | L | A | 0.5686 | |
| 221 | K | A | -1.1796 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8819 | |
| 224 | N | A | -1.6130 | |
| 225 | E | A | -1.2400 | |
| 226 | A | A | -0.7682 | |
| 227 | Y | A | -0.3874 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6036 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.0798 | |
| 234 | F | A | 0.1668 | |
| 235 | G | A | -0.8840 | |
| 236 | R | A | -2.5432 | |
| 237 | R | A | -3.0323 | |
| 238 | E | A | -1.7763 | |
| 239 | Q | A | 0.0877 | |
| 240 | V | A | 1.5564 | |
| 241 | Y | A | 0.9988 | |
| 242 | A | A | 0.0594 | |
| 243 | R | A | -1.4094 | |
| 244 | H | A | -1.0526 | |
| 245 | F | A | 0.0357 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6108 | |
| 249 | A | A | -1.2361 | |
| 250 | G | A | -0.7328 | |
| 251 | P | A | -0.5886 | |
| 252 | V | A | -0.5513 | |
| 253 | G | A | -0.9168 | |
| 254 | H | A | -1.0456 | |
| 255 | P | A | -0.4802 | |
| 256 | L | A | 0.5022 | |
| 257 | P | A | -0.0766 | |
| 258 | S | A | -0.1423 | |
| 259 | A | A | 0.0000 | |
| 260 | P | A | -0.5805 | |
| 261 | P | A | -0.4393 | |
| 262 | P | A | -0.3237 | |
| 263 | S | A | 0.0375 | |
| 264 | P | A | 0.3936 | |
| 265 | L | A | 1.4997 | |
| 266 | Y | A | 0.7979 | |
| 267 | T | A | 0.0416 | |
| 268 | P | A | 0.2337 | |
| 269 | P | A | 0.2476 | |
| 270 | P | A | -0.3357 | |
| 271 | P | A | -0.0806 | |
| 272 | T | A | -0.1827 | |
| 273 | S | A | 0.2806 | |
| 274 | P | A | 0.5746 | |
| 275 | Y | A | 1.5396 | |
| 276 | A | A | 1.3377 | |
| 277 | V | A | 2.2762 | |
| 278 | L | A | 1.8435 | |
| 279 | P | A | 0.3951 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.5116 | |
| 282 | D | A | -0.0196 | |
| 283 | Y | A | 1.2494 | |
| 284 | F | A | 0.9087 | |
| 285 | G | A | 0.2119 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8589 | |
| 291 | L | A | 1.6891 | |
| 292 | V | A | 0.6457 | |
| 293 | S | A | -0.1518 | |
| 294 | S | A | -0.8451 | |
| 295 | D | A | -1.8868 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.1758 | |
| 298 | L | A | -1.3024 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7556 | |
| 301 | R | A | -2.0353 | |
| 302 | P | A | -1.0682 | |
| 303 | F | A | -0.1464 | |
| 304 | W | A | -0.3623 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.1591 | |
| 307 | R | A | -2.8876 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6919 | |
| 310 | G | A | -1.3411 | |
| 311 | N | A | -1.3669 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7932 | |
| 319 | N | A | -0.8755 | |
| 320 | E | A | -1.0371 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4006 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1994 | |
| 333 | N | A | 0.4090 | |
| 334 | F | A | 1.3364 | |
| 335 | T | A | 0.8034 | |
| 336 | I | A | 0.4380 | |
| 337 | S | A | -0.8701 | |
| 338 | Q | A | -1.6104 | |
| 339 | Q | A | -1.2031 | |
| 340 | L | A | 0.3910 | |
| 341 | S | A | -0.1812 | |
| 342 | T | A | -0.7345 | |
| 343 | P | A | -1.4465 | |
| 344 | K | A | -2.4566 | |
| 345 | N | A | -2.1182 | |
| 346 | N | A | -1.2592 | |
| 347 | V | A | 0.7914 | |
| 348 | Y | A | 1.0412 | |
| 349 | D | A | -0.6350 | |
| 350 | P | A | -0.9264 | |
| 351 | S | A | -0.5804 | |
| 352 | N | A | -0.5742 | |
| 353 | F | A | -0.8265 | |
| 354 | K | A | -1.8645 | |
| 355 | N | A | -1.5259 | |
| 356 | Y | A | 0.0644 | |
| 357 | L | A | 0.7778 | |
| 358 | R | A | 0.9654 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1773 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.2341 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0378 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6888 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2792 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3255 | |
| 376 | L | A | -1.7259 | |
| 377 | D | A | -2.0119 | |
| 378 | P | A | -1.0776 | |
| 379 | G | A | -1.0864 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -0.6020 | |
| 382 | A | A | -0.7030 | |
| 383 | H | A | -0.8855 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4181 | |
| 386 | T | A | -0.5808 | |
| 387 | M | A | -0.3743 | |
| 388 | N | A | -0.8765 | |
| 389 | P | A | -1.2478 | |
| 390 | T | A | -1.4890 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4662 | |
| 393 | E | A | -2.8471 | |
| 394 | N | A | -2.3382 | |
| 395 | W | A | -1.4861 | |
| 396 | N | A | -1.3150 | |
| 397 | L | A | -0.2224 | |
| 398 | G | A | 0.5824 | |
| 399 | F | A | 2.3810 | |
| 400 | V | A | 1.7728 | |
| 401 | P | A | 0.0404 | |
| 402 | P | A | -1.8997 | |
| 403 | K | A | -3.3609 | |
| 404 | E | A | -3.8104 | |
| 405 | R | A | -4.0355 | |
| 406 | E | A | -3.8018 | |
| 407 | D | A | -2.8559 | |
| 408 | P | A | -1.7572 | |
| 409 | Y | A | -0.9918 | |
| 410 | K | A | -2.1059 | |
| 411 | G | A | -0.6272 | |
| 412 | L | A | 0.6645 | |
| 413 | I | A | 1.6403 | |
| 414 | F | A | 0.6976 | |
| 415 | W | A | -0.2958 | |
| 416 | E | A | -1.6370 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9581 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0864 | |
| 421 | E | A | -2.7019 | |
| 422 | R | A | -2.2619 | |
| 423 | F | A | -1.2418 | |
| 424 | S | A | -1.5057 | |
| 425 | Q | A | -1.8788 | |
| 426 | D | A | -3.1045 | |
| 427 | L | A | 0.0000 | |
| 428 | D | A | -3.1918 | |
| 429 | Q | A | -2.8113 | |
| 430 | F | A | -1.6792 | |
| 431 | A | A | -1.1782 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.4204 | |
| 435 | K | A | -1.3325 | |
| 436 | F | A | -0.1804 | |
| 437 | L | A | 0.7126 | |
| 438 | Y | A | 0.5798 | |
| 439 | Q | A | -0.4471 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine