| Chain sequence(s) |
A: GVAVSPWESPGTVESFMGTFLRNVSTKSAFSEEQISDMSTIGQTLLQSMDGIGGKNVNTHKMLSSMNMAFASSIAEIAIQEGGATLSQKSTAIGNALLNAFAQTVGQINGGNVNNVIEMAQNFVQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:57)
[INFO] Main: Simulation completed successfully. (00:01:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.4153 | |
| 2 | V | A | 1.7071 | |
| 3 | A | A | 1.0530 | |
| 4 | V | A | 0.6678 | |
| 5 | S | A | -0.2956 | |
| 6 | P | A | 0.0000 | |
| 7 | W | A | -1.4095 | |
| 8 | E | A | -2.1626 | |
| 9 | S | A | -1.4549 | |
| 10 | P | A | -1.4906 | |
| 11 | G | A | -1.5031 | |
| 12 | T | A | -1.0974 | |
| 13 | V | A | 0.0000 | |
| 14 | E | A | -1.9360 | |
| 15 | S | A | -1.0311 | |
| 16 | F | A | 0.0000 | |
| 17 | M | A | 0.0000 | |
| 18 | G | A | -1.0541 | |
| 19 | T | A | -1.2627 | |
| 20 | F | A | 0.0000 | |
| 21 | L | A | -1.0478 | |
| 22 | R | A | -2.1697 | |
| 23 | N | A | -1.7592 | |
| 24 | V | A | 0.0000 | |
| 25 | S | A | -1.5303 | |
| 26 | T | A | -1.3795 | |
| 27 | K | A | -2.1854 | |
| 28 | S | A | -1.4212 | |
| 29 | A | A | 0.0000 | |
| 30 | F | A | 0.0000 | |
| 31 | S | A | -2.4229 | |
| 32 | E | A | -3.0256 | |
| 33 | E | A | -3.2297 | |
| 34 | Q | A | 0.0000 | |
| 35 | I | A | -2.0192 | |
| 36 | S | A | -2.0474 | |
| 37 | D | A | -2.5915 | |
| 38 | M | A | 0.0000 | |
| 39 | S | A | -1.2969 | |
| 40 | T | A | -0.9286 | |
| 41 | I | A | -0.6001 | |
| 42 | G | A | 0.0000 | |
| 43 | Q | A | -1.6791 | |
| 44 | T | A | -0.8091 | |
| 45 | L | A | -0.8915 | |
| 46 | L | A | -1.5376 | |
| 47 | Q | A | -2.1446 | |
| 48 | S | A | -1.3302 | |
| 49 | M | A | 0.0000 | |
| 50 | D | A | -2.7601 | |
| 51 | G | A | -1.6737 | |
| 52 | I | A | -1.4327 | |
| 53 | G | A | -1.9053 | |
| 54 | G | A | -1.8749 | |
| 55 | K | A | -2.5943 | |
| 56 | N | A | -2.0350 | |
| 57 | V | A | -1.2051 | |
| 58 | N | A | -2.1415 | |
| 59 | T | A | -2.1729 | |
| 60 | H | A | -2.5496 | |
| 61 | K | A | -2.6158 | |
| 62 | M | A | -1.1596 | |
| 63 | L | A | 0.0000 | |
| 64 | S | A | -1.0325 | |
| 65 | S | A | -0.5389 | |
| 66 | M | A | 0.0000 | |
| 67 | N | A | 0.0000 | |
| 68 | M | A | 0.5686 | |
| 69 | A | A | 0.3152 | |
| 70 | F | A | 0.0000 | |
| 71 | A | A | 0.0000 | |
| 72 | S | A | -0.0478 | |
| 73 | S | A | -0.5162 | |
| 74 | I | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | E | A | -0.9388 | |
| 77 | I | A | 0.0000 | |
| 78 | A | A | 0.0000 | |
| 79 | I | A | -0.4686 | |
| 80 | Q | A | -1.8076 | |
| 81 | E | A | -2.2926 | |
| 82 | G | A | -1.8752 | |
| 83 | G | A | -1.6776 | |
| 84 | A | A | -0.7798 | |
| 85 | T | A | -0.5175 | |
| 86 | L | A | -0.2424 | |
| 87 | S | A | -0.4815 | |
| 88 | Q | A | -1.2797 | |
| 89 | K | A | 0.0000 | |
| 90 | S | A | -0.5406 | |
| 91 | T | A | -0.8066 | |
| 92 | A | A | 0.0000 | |
| 93 | I | A | 0.0000 | |
| 94 | G | A | 0.0000 | |
| 95 | N | A | -1.3774 | |
| 96 | A | A | 0.0000 | |
| 97 | L | A | 0.0000 | |
| 98 | L | A | -0.3332 | |
| 99 | N | A | -1.2968 | |
| 100 | A | A | 0.0000 | |
| 101 | F | A | 0.0000 | |
| 102 | A | A | -0.6915 | |
| 103 | Q | A | -1.3868 | |
| 104 | T | A | -0.8260 | |
| 105 | V | A | -0.2056 | |
| 106 | G | A | -0.8797 | |
| 107 | Q | A | -0.5089 | |
| 108 | I | A | 0.7204 | |
| 109 | N | A | -0.4006 | |
| 110 | G | A | -0.8436 | |
| 111 | G | A | -1.3183 | |
| 112 | N | A | -1.4081 | |
| 113 | V | A | 0.0000 | |
| 114 | N | A | -2.4972 | |
| 115 | N | A | -2.6216 | |
| 116 | V | A | 0.0000 | |
| 117 | I | A | -1.5893 | |
| 118 | E | A | -2.7235 | |
| 119 | M | A | -1.5067 | |
| 120 | A | A | 0.0000 | |
| 121 | Q | A | -1.7549 | |
| 122 | N | A | -1.7326 | |
| 123 | F | A | -0.4639 | |
| 124 | V | A | -0.3940 | |
| 125 | Q | A | -1.1371 |