Project name: a beta 42 [mutate: FL19A, FL20A]

Status: done

Started: 2026-05-29 20:30:26
Settings
Chain sequence(s) A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues FL20A,FL19A
Energy difference between WT (input) and mutated protein (by FoldX) 0.338412 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:00:37)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:46)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:01)
Show buried residues

Minimal score value
-3.0405
Maximal score value
3.8439
Average score
0.1214
Total score value
5.0994

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.7208
2 A A -2.4197
3 E A -2.5528
4 F A -0.9687
5 R A -2.7365
6 H A -3.0405
7 D A -2.5866
8 S A -1.3307
9 G A -0.5977
10 Y A -0.1734
11 E A -0.9301
12 V A 0.5733
13 H A -1.0437
14 H A -1.0730
15 Q A -0.3299
16 K A -0.9826
17 L A 0.4159
18 V A 0.3328
19 L A 1.4079 mutated: FL19A
20 L A 1.5587 mutated: FL20A
21 A A 0.3529
22 E A -0.9989
23 D A -1.3254
24 V A -0.4831
25 G A -1.3222
26 S A -1.4813
27 N A -1.9666
28 K A -1.7458
29 G A -0.2449
30 A A 0.2965
31 I A 2.3380
32 I A 3.1878
33 G A 2.2914
34 L A 3.0356
35 M A 3.4113
36 V A 2.9301
37 G A 1.9799
38 G A 1.8506
39 V A 3.0303
40 V A 3.8439
41 I A 3.4830
42 A A 1.8344
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Laboratory of Theory of Biopolymers 2018