| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | FL20A,FL19A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.338412 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:00:37)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:46)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.7208 | |
| 2 | A | A | -2.4197 | |
| 3 | E | A | -2.5528 | |
| 4 | F | A | -0.9687 | |
| 5 | R | A | -2.7365 | |
| 6 | H | A | -3.0405 | |
| 7 | D | A | -2.5866 | |
| 8 | S | A | -1.3307 | |
| 9 | G | A | -0.5977 | |
| 10 | Y | A | -0.1734 | |
| 11 | E | A | -0.9301 | |
| 12 | V | A | 0.5733 | |
| 13 | H | A | -1.0437 | |
| 14 | H | A | -1.0730 | |
| 15 | Q | A | -0.3299 | |
| 16 | K | A | -0.9826 | |
| 17 | L | A | 0.4159 | |
| 18 | V | A | 0.3328 | |
| 19 | L | A | 1.4079 | mutated: FL19A |
| 20 | L | A | 1.5587 | mutated: FL20A |
| 21 | A | A | 0.3529 | |
| 22 | E | A | -0.9989 | |
| 23 | D | A | -1.3254 | |
| 24 | V | A | -0.4831 | |
| 25 | G | A | -1.3222 | |
| 26 | S | A | -1.4813 | |
| 27 | N | A | -1.9666 | |
| 28 | K | A | -1.7458 | |
| 29 | G | A | -0.2449 | |
| 30 | A | A | 0.2965 | |
| 31 | I | A | 2.3380 | |
| 32 | I | A | 3.1878 | |
| 33 | G | A | 2.2914 | |
| 34 | L | A | 3.0356 | |
| 35 | M | A | 3.4113 | |
| 36 | V | A | 2.9301 | |
| 37 | G | A | 1.9799 | |
| 38 | G | A | 1.8506 | |
| 39 | V | A | 3.0303 | |
| 40 | V | A | 3.8439 | |
| 41 | I | A | 3.4830 | |
| 42 | A | A | 1.8344 |