| Chain sequence(s) |
A: GPRPENPEPELRPDSDFVTPTDLLYIAETDLITEEGDPFKDVVVDGKVEKPRVSAYQWKVFKLTLPDPNKMPLPSPDFINPETEILIWRLLAFKIHRFGKLGKGTVGHPNFNKLGDVDNPTEYQHETADVRVNFSFTPKYKQQYIIGDKPPLGVYTTPAPPAPGLPPGALPPLEVKRDIIQHGDMADIGFGARDFKALLPDKDDVPDLILDTSTKEPDYDGMLAEPYGDRLFTYDSYEKSKDVKKYVRAGPDLIPLPNAGPPSPLYVRPPPTSPYAVLPSYDYFTIPDSGEITEEDLLFNKPVFLEKSAGLNDFVLWHNQLYITVLDNSRAEIETITTQLSVPEPNVYDPSYYKTSKRYTEEYKLSLIVQLCKIPLTPETLAEIARRDPRILVDANLPFIPPVERPDPYAGLKFKEIDLTDKLSSDLSKYPLGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.1148 | |
| 2 | P | A | -1.6912 | |
| 3 | R | A | -2.9215 | |
| 4 | P | A | -2.5773 | |
| 5 | E | A | -3.4736 | |
| 6 | N | A | -3.1530 | |
| 7 | P | A | -2.6648 | |
| 8 | E | A | -3.0908 | |
| 9 | P | A | -2.2442 | |
| 10 | E | A | -2.4073 | |
| 11 | L | A | -1.2626 | |
| 12 | R | A | -1.2858 | |
| 13 | P | A | -1.0064 | |
| 14 | D | A | 0.0000 | |
| 15 | S | A | -1.2690 | |
| 16 | D | A | -2.0544 | |
| 17 | F | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.6541 | |
| 20 | P | A | -0.7128 | |
| 21 | T | A | -0.8744 | |
| 22 | D | A | -1.5891 | |
| 23 | L | A | -0.4745 | |
| 24 | L | A | -0.1391 | |
| 25 | Y | A | -0.0452 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.6075 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2860 | |
| 31 | L | A | 0.3055 | |
| 32 | I | A | 0.0000 | |
| 33 | T | A | -0.4037 | |
| 34 | E | A | -0.8071 | |
| 35 | E | A | -1.6470 | |
| 36 | G | A | 0.0000 | |
| 37 | D | A | -2.3403 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -1.3394 | |
| 40 | K | A | -2.1540 | |
| 41 | D | A | -1.8380 | |
| 42 | V | A | -0.2957 | |
| 43 | V | A | 0.7660 | |
| 44 | V | A | 0.2727 | |
| 45 | D | A | -1.5024 | |
| 46 | G | A | -1.0548 | |
| 47 | K | A | -1.3831 | |
| 48 | V | A | -0.0585 | |
| 49 | E | A | -1.5158 | |
| 50 | K | A | -1.8483 | |
| 51 | P | A | -1.6568 | |
| 52 | R | A | -1.9316 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.1652 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3898 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.7359 | |
| 70 | K | A | -2.0091 | |
| 71 | M | A | -0.9215 | |
| 72 | P | A | -0.4445 | |
| 73 | L | A | -0.1653 | |
| 74 | P | A | -0.2281 | |
| 75 | S | A | -0.6482 | |
| 76 | P | A | -1.1442 | |
| 77 | D | A | -1.9991 | |
| 78 | F | A | -0.9052 | |
| 79 | I | A | 0.0000 | |
| 80 | N | A | -2.2696 | |
| 81 | P | A | -2.0629 | |
| 82 | E | A | -2.4361 | |
| 83 | T | A | -1.5376 | |
| 84 | E | A | -1.4929 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.4588 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | -0.7987 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.4913 | |
| 97 | R | A | 0.0000 | |
| 98 | F | A | 0.1923 | |
| 99 | G | A | -0.9510 | |
| 100 | K | A | -1.6947 | |
| 101 | L | A | -0.7828 | |
| 102 | G | A | -1.2323 | |
| 103 | K | A | -1.6284 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5010 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.7810 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.4283 | |
| 110 | N | A | -2.1782 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.5906 | |
| 113 | K | A | -0.7236 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -2.2221 | |
| 117 | V | A | -1.7804 | |
| 118 | D | A | -3.2018 | |
| 119 | N | A | -2.9295 | |
| 120 | P | A | -1.9120 | |
| 121 | T | A | -1.6068 | |
| 122 | E | A | -2.0481 | |
| 123 | Y | A | -0.3414 | |
| 124 | Q | A | -0.9176 | |
| 125 | H | A | -0.8071 | |
| 126 | E | A | -1.6585 | |
| 127 | T | A | -1.3660 | |
| 128 | A | A | -1.2072 | |
| 129 | D | A | -2.2079 | |
| 130 | V | A | -1.5568 | |
| 131 | R | A | -1.9048 | |
| 132 | V | A | -1.0659 | |
| 133 | N | A | -1.5627 | |
| 134 | F | A | -0.8005 | |
| 135 | S | A | -0.5052 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.5743 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Y | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | Q | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | K | A | -0.3970 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.5515 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | -0.6252 | |
| 155 | Y | A | -0.7673 | |
| 156 | T | A | -0.1009 | |
| 157 | T | A | 0.0000 | |
| 158 | P | A | 0.4206 | |
| 159 | A | A | 0.1774 | |
| 160 | P | A | -0.3262 | |
| 161 | P | A | -0.0077 | |
| 162 | A | A | -0.1942 | |
| 163 | P | A | -0.3406 | |
| 164 | G | A | -0.2778 | |
| 165 | L | A | 0.4948 | |
| 166 | P | A | -0.0303 | |
| 167 | P | A | -0.2393 | |
| 168 | G | A | 0.0611 | |
| 169 | A | A | 0.6855 | |
| 170 | L | A | 1.8161 | |
| 171 | P | A | 0.9058 | |
| 172 | P | A | 0.6724 | |
| 173 | L | A | 1.4015 | |
| 174 | E | A | 0.3333 | |
| 175 | V | A | 0.8369 | |
| 176 | K | A | -1.1602 | |
| 177 | R | A | -2.0549 | |
| 178 | D | A | -1.5084 | |
| 179 | I | A | -0.4936 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.8684 | |
| 182 | H | A | -1.1116 | |
| 183 | G | A | -0.7802 | |
| 184 | D | A | -0.6830 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.0810 | |
| 190 | F | A | -0.1296 | |
| 191 | G | A | -0.4903 | |
| 192 | A | A | -0.5344 | |
| 193 | R | A | -1.4023 | |
| 194 | D | A | -1.7143 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -2.8906 | |
| 197 | A | A | -1.3794 | |
| 198 | L | A | -0.4892 | |
| 199 | L | A | -1.4217 | |
| 200 | P | A | -1.4830 | |
| 201 | D | A | -2.1425 | |
| 202 | K | A | -3.1158 | |
| 203 | D | A | -2.0610 | |
| 204 | D | A | -1.4033 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.9018 | |
| 208 | L | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -2.0937 | |
| 211 | D | A | -2.7934 | |
| 212 | T | A | -1.7608 | |
| 213 | S | A | -1.2693 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | E | A | -0.5554 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | Y | A | -0.4424 | |
| 220 | D | A | -1.4834 | |
| 221 | G | A | -0.9603 | |
| 222 | M | A | 0.0000 | |
| 223 | L | A | 0.0216 | |
| 224 | A | A | -0.3329 | |
| 225 | E | A | -0.4864 | |
| 226 | P | A | -0.1757 | |
| 227 | Y | A | -0.0045 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | R | A | -0.2496 | |
| 231 | L | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.2336 | |
| 234 | Y | A | 0.1803 | |
| 235 | D | A | -0.4089 | |
| 236 | S | A | -0.3873 | |
| 237 | Y | A | -0.3975 | |
| 238 | E | A | -1.3260 | |
| 239 | K | A | -1.5966 | |
| 240 | S | A | -2.0279 | |
| 241 | K | A | -3.0527 | |
| 242 | D | A | -3.1652 | |
| 243 | V | A | -1.9952 | |
| 244 | K | A | -3.1650 | |
| 245 | K | A | -2.6411 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | A | A | -1.2127 | |
| 250 | G | A | -0.6091 | |
| 251 | P | A | -0.1936 | |
| 252 | D | A | 0.6003 | |
| 253 | L | A | 2.1840 | |
| 254 | I | A | 2.5877 | |
| 255 | P | A | 1.0417 | |
| 256 | L | A | 0.8635 | |
| 257 | P | A | -0.2246 | |
| 258 | N | A | -0.6541 | |
| 259 | A | A | -0.8196 | |
| 260 | G | A | -0.8689 | |
| 261 | P | A | -0.7688 | |
| 262 | P | A | -0.1891 | |
| 263 | S | A | 0.3331 | |
| 264 | P | A | 0.7717 | |
| 265 | L | A | 1.8385 | |
| 266 | Y | A | 1.5313 | |
| 267 | V | A | 1.7030 | |
| 268 | R | A | 0.6286 | |
| 269 | P | A | 0.3879 | |
| 270 | P | A | -0.2057 | |
| 271 | P | A | -0.1128 | |
| 272 | T | A | 0.0031 | |
| 273 | S | A | 0.2488 | |
| 274 | P | A | 0.6528 | |
| 275 | Y | A | 1.5042 | |
| 276 | A | A | 0.9767 | |
| 277 | V | A | 1.7594 | |
| 278 | L | A | 1.0325 | |
| 279 | P | A | 0.1887 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.1799 | |
| 282 | D | A | -0.7188 | |
| 283 | Y | A | 0.3994 | |
| 284 | F | A | -0.0360 | |
| 285 | T | A | -0.8638 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.9881 | |
| 289 | S | A | 0.0000 | |
| 290 | G | A | 0.0000 | |
| 291 | E | A | -2.3931 | |
| 292 | I | A | -1.4674 | |
| 293 | T | A | -1.8103 | |
| 294 | E | A | -2.5770 | |
| 295 | E | A | -2.6898 | |
| 296 | D | A | -1.8505 | |
| 297 | L | A | -1.0839 | |
| 298 | L | A | -0.7680 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3020 | |
| 301 | K | A | -1.8734 | |
| 302 | P | A | -0.9358 | |
| 303 | V | A | -0.1486 | |
| 304 | F | A | -0.3967 | |
| 305 | L | A | -0.9383 | |
| 306 | E | A | -2.4922 | |
| 307 | K | A | -2.5554 | |
| 308 | S | A | -1.2164 | |
| 309 | A | A | -0.2082 | |
| 310 | G | A | -0.1952 | |
| 311 | L | A | -0.3065 | |
| 312 | N | A | 0.0000 | |
| 313 | D | A | -1.1159 | |
| 314 | F | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8369 | |
| 319 | N | A | -0.7330 | |
| 320 | Q | A | -0.6344 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -1.8511 | |
| 333 | I | A | -1.5743 | |
| 334 | E | A | -2.3219 | |
| 335 | T | A | -1.3030 | |
| 336 | I | A | -0.6530 | |
| 337 | T | A | -0.7285 | |
| 338 | T | A | -0.6188 | |
| 339 | Q | A | -0.4706 | |
| 340 | L | A | 0.9711 | |
| 341 | S | A | 0.8389 | |
| 342 | V | A | 1.3972 | |
| 343 | P | A | 0.1898 | |
| 344 | E | A | -1.1796 | |
| 345 | P | A | -0.7982 | |
| 346 | N | A | -0.7807 | |
| 347 | V | A | 0.9516 | |
| 348 | Y | A | 1.1854 | |
| 349 | D | A | -0.0052 | |
| 350 | P | A | -0.2430 | |
| 351 | S | A | -0.3601 | |
| 352 | Y | A | 0.1550 | |
| 353 | Y | A | -0.3222 | |
| 354 | K | A | -1.4950 | |
| 355 | T | A | -1.1999 | |
| 356 | S | A | -1.4039 | |
| 357 | K | A | -1.9353 | |
| 358 | R | A | -2.2234 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -1.1253 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -0.2705 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.4716 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.3925 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.5944 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8467 | |
| 376 | L | A | -0.8167 | |
| 377 | T | A | -0.6966 | |
| 378 | P | A | -1.0443 | |
| 379 | E | A | -1.8442 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.5923 | |
| 382 | A | A | -0.9196 | |
| 383 | E | A | 0.0000 | |
| 384 | I | A | 0.0000 | |
| 385 | A | A | -0.8751 | |
| 386 | R | A | -1.4015 | |
| 387 | R | A | -0.8592 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -0.7196 | |
| 390 | R | A | -1.0794 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -0.4196 | |
| 393 | V | A | -0.9101 | |
| 394 | D | A | -2.2356 | |
| 395 | A | A | -1.5538 | |
| 396 | N | A | -1.3910 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.1542 | |
| 399 | F | A | 1.7611 | |
| 400 | I | A | 0.9679 | |
| 401 | P | A | 0.4005 | |
| 402 | P | A | -0.2347 | |
| 403 | V | A | 0.0761 | |
| 404 | E | A | -2.0238 | |
| 405 | R | A | -2.3172 | |
| 406 | P | A | -1.7292 | |
| 407 | D | A | -1.9078 | |
| 408 | P | A | -0.9700 | |
| 409 | Y | A | -0.5761 | |
| 410 | A | A | -0.7228 | |
| 411 | G | A | -0.7312 | |
| 412 | L | A | -0.5415 | |
| 413 | K | A | -1.9649 | |
| 414 | F | A | -1.4763 | |
| 415 | K | A | -1.9305 | |
| 416 | E | A | -2.6155 | |
| 417 | I | A | -1.9351 | |
| 418 | D | A | -2.6094 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5628 | |
| 421 | D | A | -2.2618 | |
| 422 | K | A | -1.7325 | |
| 423 | L | A | -0.6070 | |
| 424 | S | A | -0.7138 | |
| 425 | S | A | -0.5368 | |
| 426 | D | A | -1.3330 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.5567 | |
| 429 | K | A | -2.1480 | |
| 430 | Y | A | -1.2588 | |
| 431 | P | A | -1.0301 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.0537 | |
| 435 | E | A | -1.5987 | |
| 436 | Y | A | -0.6799 | |
| 437 | L | A | -0.2648 | |
| 438 | N | A | -1.9512 | |
| 439 | R | A | -2.1774 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine