Project name: 2ND 1

Status: done

Started: 2026-05-26 15:17:33
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Chain sequence(s) A: QVQLVESGGGLVQPGGSLRLSCAASGYTITSIYVMGWFRQAPGQGLEAVAAISSSSSSSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAADYDSSSSYASWSGFAYWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:10)
Show buried residues

Minimal score value
-2.9519
Maximal score value
1.7051
Average score
-0.462
Total score value
-59.1369

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.4365
2 V A 0.0000
3 Q A -1.0504
4 L A 0.0000
5 V A 1.1194
6 E A 0.5005
7 S A -0.1249
8 G A -0.7153
9 G A 0.0743
10 G A 0.6505
11 L A 1.3097
12 V A 0.0000
13 Q A -1.5415
14 P A -1.8660
15 G A -1.5849
16 G A -1.0858
17 S A -1.3681
18 L A -0.9527
19 R A -2.1454
20 L A 0.0000
21 S A -0.4078
22 C A 0.0000
23 A A -0.1587
24 A A 0.0000
25 S A -0.4746
26 G A -0.6449
27 Y A 0.5370
28 T A -0.0961
29 I A 0.0000
30 T A -0.3610
31 S A -0.1216
32 I A 0.0000
33 Y A -0.2692
34 V A 0.0000
35 M A 0.0000
36 G A 0.0000
37 W A 0.0000
38 F A 0.0000
39 R A 0.0000
40 Q A -0.3648
41 A A -0.8256
42 P A -0.9835
43 G A -1.1873
44 Q A -1.6184
45 G A -0.7577
46 L A 0.5416
47 E A -0.3208
48 A A 0.1376
49 V A 0.0000
50 A A 0.0000
51 A A 0.0000
52 I A 0.0000
53 S A 0.0000
54 S A -0.3428
55 S A -0.4161
56 S A -0.4353
57 S A -0.4983
58 S A -0.5450
59 S A -0.5061
60 S A -0.1793
61 T A 0.1629
62 Y A 0.2059
63 Y A -0.6151
64 A A 0.0000
65 D A -2.4452
66 S A -1.8000
67 V A 0.0000
68 K A -2.5613
69 G A -1.7709
70 R A -1.5629
71 F A 0.0000
72 T A -0.7901
73 I A 0.0000
74 S A -0.5406
75 R A -1.2028
76 D A -1.8914
77 N A -2.1919
78 S A -1.8722
79 K A -2.5551
80 N A -1.7937
81 T A 0.0000
82 L A 0.0000
83 Y A -0.6695
84 L A 0.0000
85 Q A -1.2983
86 M A 0.0000
87 N A -1.5861
88 S A -1.4701
89 L A 0.0000
90 R A -2.9519
91 A A -2.0471
92 E A -2.4640
93 D A 0.0000
94 T A -0.5340
95 A A 0.0000
96 V A 0.8827
97 Y A 0.0000
98 Y A 0.4653
99 C A 0.0000
100 A A 0.0000
101 A A 0.0000
102 D A 0.0000
103 Y A -0.5327
104 D A -1.7541
105 S A -1.0549
106 S A -0.8937
107 S A -0.7076
108 S A -0.3238
109 Y A 0.3438
110 A A 0.1674
111 S A -0.0657
112 W A 0.1749
113 S A -0.1263
114 G A -0.4068
115 F A 0.0000
116 A A 0.1363
117 Y A 0.3470
118 W A 0.4774
119 G A -0.0123
120 Q A -0.8342
121 G A 0.1053
122 T A 0.6158
123 L A 1.7051
124 V A 0.0000
125 T A 0.2698
126 V A 0.0000
127 S A -0.8218
128 S A -0.5326
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Laboratory of Theory of Biopolymers 2018