| Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASGYTITSIYVMGWFRQAPGQGLEAVAAISSSSSSSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAADYDSSSSYASWSGFAYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.4365 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.0504 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.1194 | |
| 6 | E | A | 0.5005 | |
| 7 | S | A | -0.1249 | |
| 8 | G | A | -0.7153 | |
| 9 | G | A | 0.0743 | |
| 10 | G | A | 0.6505 | |
| 11 | L | A | 1.3097 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.5415 | |
| 14 | P | A | -1.8660 | |
| 15 | G | A | -1.5849 | |
| 16 | G | A | -1.0858 | |
| 17 | S | A | -1.3681 | |
| 18 | L | A | -0.9527 | |
| 19 | R | A | -2.1454 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4078 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1587 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.4746 | |
| 26 | G | A | -0.6449 | |
| 27 | Y | A | 0.5370 | |
| 28 | T | A | -0.0961 | |
| 29 | I | A | 0.0000 | |
| 30 | T | A | -0.3610 | |
| 31 | S | A | -0.1216 | |
| 32 | I | A | 0.0000 | |
| 33 | Y | A | -0.2692 | |
| 34 | V | A | 0.0000 | |
| 35 | M | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | F | A | 0.0000 | |
| 39 | R | A | 0.0000 | |
| 40 | Q | A | -0.3648 | |
| 41 | A | A | -0.8256 | |
| 42 | P | A | -0.9835 | |
| 43 | G | A | -1.1873 | |
| 44 | Q | A | -1.6184 | |
| 45 | G | A | -0.7577 | |
| 46 | L | A | 0.5416 | |
| 47 | E | A | -0.3208 | |
| 48 | A | A | 0.1376 | |
| 49 | V | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | I | A | 0.0000 | |
| 53 | S | A | 0.0000 | |
| 54 | S | A | -0.3428 | |
| 55 | S | A | -0.4161 | |
| 56 | S | A | -0.4353 | |
| 57 | S | A | -0.4983 | |
| 58 | S | A | -0.5450 | |
| 59 | S | A | -0.5061 | |
| 60 | S | A | -0.1793 | |
| 61 | T | A | 0.1629 | |
| 62 | Y | A | 0.2059 | |
| 63 | Y | A | -0.6151 | |
| 64 | A | A | 0.0000 | |
| 65 | D | A | -2.4452 | |
| 66 | S | A | -1.8000 | |
| 67 | V | A | 0.0000 | |
| 68 | K | A | -2.5613 | |
| 69 | G | A | -1.7709 | |
| 70 | R | A | -1.5629 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.7901 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.5406 | |
| 75 | R | A | -1.2028 | |
| 76 | D | A | -1.8914 | |
| 77 | N | A | -2.1919 | |
| 78 | S | A | -1.8722 | |
| 79 | K | A | -2.5551 | |
| 80 | N | A | -1.7937 | |
| 81 | T | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | Y | A | -0.6695 | |
| 84 | L | A | 0.0000 | |
| 85 | Q | A | -1.2983 | |
| 86 | M | A | 0.0000 | |
| 87 | N | A | -1.5861 | |
| 88 | S | A | -1.4701 | |
| 89 | L | A | 0.0000 | |
| 90 | R | A | -2.9519 | |
| 91 | A | A | -2.0471 | |
| 92 | E | A | -2.4640 | |
| 93 | D | A | 0.0000 | |
| 94 | T | A | -0.5340 | |
| 95 | A | A | 0.0000 | |
| 96 | V | A | 0.8827 | |
| 97 | Y | A | 0.0000 | |
| 98 | Y | A | 0.4653 | |
| 99 | C | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | D | A | 0.0000 | |
| 103 | Y | A | -0.5327 | |
| 104 | D | A | -1.7541 | |
| 105 | S | A | -1.0549 | |
| 106 | S | A | -0.8937 | |
| 107 | S | A | -0.7076 | |
| 108 | S | A | -0.3238 | |
| 109 | Y | A | 0.3438 | |
| 110 | A | A | 0.1674 | |
| 111 | S | A | -0.0657 | |
| 112 | W | A | 0.1749 | |
| 113 | S | A | -0.1263 | |
| 114 | G | A | -0.4068 | |
| 115 | F | A | 0.0000 | |
| 116 | A | A | 0.1363 | |
| 117 | Y | A | 0.3470 | |
| 118 | W | A | 0.4774 | |
| 119 | G | A | -0.0123 | |
| 120 | Q | A | -0.8342 | |
| 121 | G | A | 0.1053 | |
| 122 | T | A | 0.6158 | |
| 123 | L | A | 1.7051 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | 0.2698 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -0.8218 | |
| 128 | S | A | -0.5326 |