| Chain sequence(s) |
A: GVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGAAGAGVLGGLVPGAPGAVPGVPGTGGVPG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:32)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.2741 | |
| 2 | V | A | 1.5216 | |
| 3 | P | A | 0.6375 | |
| 4 | G | A | 0.5522 | |
| 5 | V | A | 1.4626 | |
| 6 | P | A | 0.4710 | |
| 7 | G | A | 0.3911 | |
| 8 | A | A | 0.8561 | |
| 9 | I | A | 1.8664 | |
| 10 | P | A | 0.8615 | |
| 11 | G | A | 0.7842 | |
| 12 | I | A | 1.8333 | |
| 13 | G | A | 0.7285 | |
| 14 | G | A | 0.8433 | |
| 15 | I | A | 2.0830 | |
| 16 | A | A | 0.9808 | |
| 17 | G | A | 0.8054 | |
| 18 | V | A | 1.5922 | |
| 19 | G | A | 0.2343 | |
| 20 | T | A | 0.0687 | |
| 21 | P | A | -0.0796 | |
| 22 | A | A | -0.0826 | |
| 23 | A | A | 0.1254 | |
| 24 | A | A | -0.0298 | |
| 25 | A | A | 0.0765 | |
| 26 | A | A | 0.0163 | |
| 27 | A | A | -0.0289 | |
| 28 | A | A | -0.2090 | |
| 29 | A | A | -0.4964 | |
| 30 | A | A | -0.5378 | |
| 31 | A | A | -0.8451 | |
| 32 | K | A | -1.6125 | |
| 33 | A | A | -0.2762 | |
| 34 | A | A | -0.6254 | |
| 35 | K | A | -1.5356 | |
| 36 | Y | A | 0.4638 | |
| 37 | G | A | 0.5760 | |
| 38 | A | A | 0.3424 | |
| 39 | A | A | 0.2763 | |
| 40 | A | A | 0.6948 | |
| 41 | G | A | 0.9691 | |
| 42 | L | A | 2.3697 | |
| 43 | V | A | 2.2172 | |
| 44 | P | A | 0.5880 | |
| 45 | G | A | -0.0678 | |
| 46 | G | A | -0.2958 | |
| 47 | P | A | -0.4529 | |
| 48 | G | A | 0.0355 | |
| 49 | F | A | 1.4153 | |
| 50 | G | A | 0.3374 | |
| 51 | P | A | 0.3770 | |
| 52 | G | A | 0.8296 | |
| 53 | V | A | 2.6624 | |
| 54 | V | A | 2.8636 | |
| 55 | G | A | 1.7119 | |
| 56 | V | A | 1.8954 | |
| 57 | P | A | 0.3360 | |
| 58 | G | A | -0.0666 | |
| 59 | A | A | 0.2448 | |
| 60 | G | A | 0.3244 | |
| 61 | V | A | 1.4678 | |
| 62 | P | A | 0.5692 | |
| 63 | G | A | 0.8084 | |
| 64 | V | A | 1.9290 | |
| 65 | G | A | 1.0173 | |
| 66 | V | A | 1.6777 | |
| 67 | P | A | 0.4251 | |
| 68 | G | A | -0.0407 | |
| 69 | A | A | 0.3653 | |
| 70 | G | A | 0.8097 | |
| 71 | I | A | 2.3511 | |
| 72 | P | A | 1.9288 | |
| 73 | V | A | 2.8134 | |
| 74 | V | A | 2.5245 | |
| 75 | P | A | 0.7611 | |
| 76 | G | A | 0.3142 | |
| 77 | A | A | 0.7328 | |
| 78 | G | A | 0.6845 | |
| 79 | I | A | 1.5047 | |
| 80 | P | A | 0.3885 | |
| 81 | G | A | 0.1566 | |
| 82 | A | A | 0.5461 | |
| 83 | A | A | 0.6578 | |
| 84 | V | A | 1.7114 | |
| 85 | P | A | 1.1179 | |
| 86 | G | A | 1.3018 | |
| 87 | V | A | 2.4906 | |
| 88 | V | A | 2.0696 | |
| 89 | S | A | 0.4771 | |
| 90 | P | A | -0.6841 | |
| 91 | E | A | -2.0740 | |
| 92 | A | A | -1.0395 | |
| 93 | A | A | -0.8420 | |
| 94 | A | A | -1.6069 | |
| 95 | K | A | -2.4724 | |
| 96 | A | A | -1.4365 | |
| 97 | A | A | -1.3093 | |
| 98 | A | A | -1.4602 | |
| 99 | K | A | -2.0718 | |
| 100 | A | A | -0.8794 | |
| 101 | A | A | -1.0608 | |
| 102 | K | A | -1.8099 | |
| 103 | Y | A | -0.3457 | |
| 104 | G | A | -0.8675 | |
| 105 | A | A | -1.0771 | |
| 106 | R | A | -1.8427 | |
| 107 | P | A | -1.0976 | |
| 108 | G | A | 0.0552 | |
| 109 | V | A | 1.6014 | |
| 110 | G | A | 0.9101 | |
| 111 | V | A | 1.6944 | |
| 112 | G | A | 0.3366 | |
| 113 | G | A | 0.0273 | |
| 114 | I | A | 0.5345 | |
| 115 | P | A | 0.3774 | |
| 116 | T | A | 0.8846 | |
| 117 | Y | A | 1.7032 | |
| 118 | G | A | 1.1857 | |
| 119 | V | A | 2.3309 | |
| 120 | G | A | 1.2191 | |
| 121 | A | A | 0.3554 | |
| 122 | G | A | -0.3409 | |
| 123 | G | A | -0.0270 | |
| 124 | F | A | 1.4192 | |
| 125 | P | A | 0.5721 | |
| 126 | G | A | 1.2352 | |
| 127 | F | A | 2.3687 | |
| 128 | G | A | 2.0534 | |
| 129 | V | A | 2.4665 | |
| 130 | G | A | 1.7735 | |
| 131 | V | A | 2.1017 | |
| 132 | G | A | 0.7010 | |
| 133 | G | A | 0.6247 | |
| 134 | I | A | 1.7154 | |
| 135 | P | A | 0.6726 | |
| 136 | G | A | 0.8503 | |
| 137 | V | A | 1.8679 | |
| 138 | A | A | 0.8382 | |
| 139 | G | A | 0.6751 | |
| 140 | V | A | 1.6816 | |
| 141 | P | A | 0.5439 | |
| 142 | G | A | 0.6553 | |
| 143 | V | A | 1.3531 | |
| 144 | G | A | 0.3131 | |
| 145 | G | A | 0.5563 | |
| 146 | V | A | 1.4723 | |
| 147 | P | A | 0.8884 | |
| 148 | G | A | 0.5776 | |
| 149 | V | A | 1.5260 | |
| 150 | G | A | 0.4450 | |
| 151 | G | A | 0.5706 | |
| 152 | V | A | 1.5767 | |
| 153 | P | A | 0.7218 | |
| 154 | G | A | 0.7446 | |
| 155 | V | A | 1.7623 | |
| 156 | G | A | 0.7505 | |
| 157 | I | A | 0.6303 | |
| 158 | S | A | -0.4108 | |
| 159 | P | A | -1.3295 | |
| 160 | E | A | -2.1209 | |
| 161 | A | A | -1.0252 | |
| 162 | Q | A | -1.6997 | |
| 163 | A | A | -1.3847 | |
| 164 | A | A | -1.1734 | |
| 165 | A | A | -1.0821 | |
| 166 | A | A | -1.0625 | |
| 167 | A | A | -1.0793 | |
| 168 | K | A | -1.8981 | |
| 169 | A | A | -0.8527 | |
| 170 | A | A | -0.9427 | |
| 171 | K | A | -1.6543 | |
| 172 | Y | A | -0.1208 | |
| 173 | G | A | -0.6100 | |
| 174 | A | A | -0.2638 | |
| 175 | A | A | -0.2312 | |
| 176 | G | A | 0.1333 | |
| 177 | A | A | 0.1288 | |
| 178 | G | A | 0.5494 | |
| 179 | V | A | 2.0508 | |
| 180 | L | A | 2.1287 | |
| 181 | G | A | 0.9714 | |
| 182 | G | A | 1.0593 | |
| 183 | L | A | 2.1570 | |
| 184 | V | A | 2.0944 | |
| 185 | P | A | 0.7341 | |
| 186 | G | A | 0.0719 | |
| 187 | A | A | -0.2496 | |
| 188 | P | A | -0.3614 | |
| 189 | G | A | -0.1879 | |
| 190 | A | A | 0.4109 | |
| 191 | V | A | 1.6158 | |
| 192 | P | A | 0.7906 | |
| 193 | G | A | 0.6349 | |
| 194 | V | A | 1.4318 | |
| 195 | P | A | 0.1482 | |
| 196 | G | A | -0.3605 | |
| 197 | T | A | -0.2668 | |
| 198 | G | A | -0.5037 | |
| 199 | G | A | -0.0222 | |
| 200 | V | A | 1.1953 | |
| 201 | P | A | 0.2148 | |
| 202 | G | A | -0.1911 |