Project name: ELN

Status: done

Started: 2026-07-21 07:46:15
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Chain sequence(s) A: GVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGAAGAGVLGGLVPGAPGAVPGVPGTGGVPG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:34)
Show buried residues

Minimal score value
-2.4724
Maximal score value
2.8636
Average score
0.4551
Total score value
91.9278

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.2741
2 V A 1.5216
3 P A 0.6375
4 G A 0.5522
5 V A 1.4626
6 P A 0.4710
7 G A 0.3911
8 A A 0.8561
9 I A 1.8664
10 P A 0.8615
11 G A 0.7842
12 I A 1.8333
13 G A 0.7285
14 G A 0.8433
15 I A 2.0830
16 A A 0.9808
17 G A 0.8054
18 V A 1.5922
19 G A 0.2343
20 T A 0.0687
21 P A -0.0796
22 A A -0.0826
23 A A 0.1254
24 A A -0.0298
25 A A 0.0765
26 A A 0.0163
27 A A -0.0289
28 A A -0.2090
29 A A -0.4964
30 A A -0.5378
31 A A -0.8451
32 K A -1.6125
33 A A -0.2762
34 A A -0.6254
35 K A -1.5356
36 Y A 0.4638
37 G A 0.5760
38 A A 0.3424
39 A A 0.2763
40 A A 0.6948
41 G A 0.9691
42 L A 2.3697
43 V A 2.2172
44 P A 0.5880
45 G A -0.0678
46 G A -0.2958
47 P A -0.4529
48 G A 0.0355
49 F A 1.4153
50 G A 0.3374
51 P A 0.3770
52 G A 0.8296
53 V A 2.6624
54 V A 2.8636
55 G A 1.7119
56 V A 1.8954
57 P A 0.3360
58 G A -0.0666
59 A A 0.2448
60 G A 0.3244
61 V A 1.4678
62 P A 0.5692
63 G A 0.8084
64 V A 1.9290
65 G A 1.0173
66 V A 1.6777
67 P A 0.4251
68 G A -0.0407
69 A A 0.3653
70 G A 0.8097
71 I A 2.3511
72 P A 1.9288
73 V A 2.8134
74 V A 2.5245
75 P A 0.7611
76 G A 0.3142
77 A A 0.7328
78 G A 0.6845
79 I A 1.5047
80 P A 0.3885
81 G A 0.1566
82 A A 0.5461
83 A A 0.6578
84 V A 1.7114
85 P A 1.1179
86 G A 1.3018
87 V A 2.4906
88 V A 2.0696
89 S A 0.4771
90 P A -0.6841
91 E A -2.0740
92 A A -1.0395
93 A A -0.8420
94 A A -1.6069
95 K A -2.4724
96 A A -1.4365
97 A A -1.3093
98 A A -1.4602
99 K A -2.0718
100 A A -0.8794
101 A A -1.0608
102 K A -1.8099
103 Y A -0.3457
104 G A -0.8675
105 A A -1.0771
106 R A -1.8427
107 P A -1.0976
108 G A 0.0552
109 V A 1.6014
110 G A 0.9101
111 V A 1.6944
112 G A 0.3366
113 G A 0.0273
114 I A 0.5345
115 P A 0.3774
116 T A 0.8846
117 Y A 1.7032
118 G A 1.1857
119 V A 2.3309
120 G A 1.2191
121 A A 0.3554
122 G A -0.3409
123 G A -0.0270
124 F A 1.4192
125 P A 0.5721
126 G A 1.2352
127 F A 2.3687
128 G A 2.0534
129 V A 2.4665
130 G A 1.7735
131 V A 2.1017
132 G A 0.7010
133 G A 0.6247
134 I A 1.7154
135 P A 0.6726
136 G A 0.8503
137 V A 1.8679
138 A A 0.8382
139 G A 0.6751
140 V A 1.6816
141 P A 0.5439
142 G A 0.6553
143 V A 1.3531
144 G A 0.3131
145 G A 0.5563
146 V A 1.4723
147 P A 0.8884
148 G A 0.5776
149 V A 1.5260
150 G A 0.4450
151 G A 0.5706
152 V A 1.5767
153 P A 0.7218
154 G A 0.7446
155 V A 1.7623
156 G A 0.7505
157 I A 0.6303
158 S A -0.4108
159 P A -1.3295
160 E A -2.1209
161 A A -1.0252
162 Q A -1.6997
163 A A -1.3847
164 A A -1.1734
165 A A -1.0821
166 A A -1.0625
167 A A -1.0793
168 K A -1.8981
169 A A -0.8527
170 A A -0.9427
171 K A -1.6543
172 Y A -0.1208
173 G A -0.6100
174 A A -0.2638
175 A A -0.2312
176 G A 0.1333
177 A A 0.1288
178 G A 0.5494
179 V A 2.0508
180 L A 2.1287
181 G A 0.9714
182 G A 1.0593
183 L A 2.1570
184 V A 2.0944
185 P A 0.7341
186 G A 0.0719
187 A A -0.2496
188 P A -0.3614
189 G A -0.1879
190 A A 0.4109
191 V A 1.6158
192 P A 0.7906
193 G A 0.6349
194 V A 1.4318
195 P A 0.1482
196 G A -0.3605
197 T A -0.2668
198 G A -0.5037
199 G A -0.0222
200 V A 1.1953
201 P A 0.2148
202 G A -0.1911
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Laboratory of Theory of Biopolymers 2018