| Chain sequence(s) |
B: AAFKDELMASLAKLKAVLEKLEELLSPEQAEKAKAKFAEIEAKVAEIIAS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:31)
[INFO] Main: Simulation completed successfully. (00:01:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.0784 | |
| 2 | A | B | -0.1187 | |
| 3 | F | B | 0.8240 | |
| 4 | K | B | -0.1802 | |
| 5 | D | B | -1.8204 | |
| 6 | E | B | -1.7647 | |
| 7 | L | B | -0.3586 | |
| 8 | M | B | -0.3653 | |
| 9 | A | B | -0.9797 | |
| 10 | S | B | -1.0193 | |
| 11 | L | B | -0.4738 | |
| 12 | A | B | -0.6726 | |
| 13 | K | B | -1.2594 | |
| 14 | L | B | -0.1194 | |
| 15 | K | B | -1.3866 | |
| 16 | A | B | -0.9881 | |
| 17 | V | B | -0.0399 | |
| 18 | L | B | -1.0320 | |
| 19 | E | B | -2.5025 | |
| 20 | K | B | -2.1115 | |
| 21 | L | B | -0.6407 | |
| 22 | E | B | -2.4295 | |
| 23 | E | B | -1.9713 | |
| 24 | L | B | 0.1973 | |
| 25 | L | B | -0.6462 | |
| 26 | S | B | -1.3852 | |
| 27 | P | B | -2.3535 | |
| 28 | E | B | -3.6819 | |
| 29 | Q | B | -3.1031 | |
| 30 | A | B | 0.0000 | |
| 31 | E | B | -4.4227 | |
| 32 | K | B | -4.2820 | |
| 33 | A | B | -3.3919 | |
| 34 | K | B | -3.8705 | |
| 35 | A | B | -3.0281 | |
| 36 | K | B | -3.3801 | |
| 37 | F | B | 0.0000 | |
| 38 | A | B | -2.3302 | |
| 39 | E | B | -2.9328 | |
| 40 | I | B | -1.9653 | |
| 41 | E | B | -1.9827 | |
| 42 | A | B | -1.7579 | |
| 43 | K | B | -2.1811 | |
| 44 | V | B | -0.8337 | |
| 45 | A | B | -0.9091 | |
| 46 | E | B | -1.5758 | |
| 47 | I | B | 0.2695 | |
| 48 | I | B | 0.4621 | |
| 49 | A | B | -0.1859 | |
| 50 | S | B | -0.0304 |