Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASNRPLHPSEQGGWFRQAPGQGLEAVAGTDPMANQAARDRDGTGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAIGPMVITQEELDYYRSTAGQGTLVTVS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:18) [INFO] Main: Simulation completed successfully. (00:01:19) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.5148 | |
2 | V | A | -0.9014 | |
3 | Q | A | -0.2727 | |
4 | L | A | 0.0000 | |
5 | V | A | 1.2703 | |
6 | E | A | 0.4263 | |
7 | S | A | -0.2825 | |
8 | G | A | -0.8795 | |
9 | G | A | 0.0806 | |
10 | G | A | 0.6427 | |
11 | L | A | 1.3497 | |
12 | V | A | 0.0000 | |
13 | Q | A | -1.4148 | |
14 | P | A | -1.6104 | |
15 | G | A | -1.4127 | |
16 | G | A | -0.9656 | |
17 | S | A | -1.2403 | |
18 | L | A | -0.9112 | |
19 | R | A | -2.1434 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.5132 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.0069 | |
24 | A | A | -0.1258 | |
25 | S | A | -0.7325 | |
26 | N | A | -1.2223 | |
27 | R | A | -1.8390 | |
28 | P | A | -0.6359 | |
29 | L | A | -0.0267 | |
30 | H | A | 0.0000 | |
31 | P | A | -0.4052 | |
32 | S | A | -0.1468 | |
33 | E | A | -0.1313 | |
34 | Q | A | -0.4624 | |
35 | G | A | 0.0000 | |
36 | G | A | 0.0000 | |
37 | W | A | 0.0000 | |
38 | F | A | 0.0755 | |
39 | R | A | -0.0008 | |
40 | Q | A | -0.4785 | |
41 | A | A | -0.8148 | |
42 | P | A | -0.9091 | |
43 | G | A | -1.2872 | |
44 | Q | A | -1.6305 | |
45 | G | A | -0.9753 | |
46 | L | A | 0.0785 | |
47 | E | A | -0.5490 | |
48 | A | A | -0.3908 | |
49 | V | A | 0.0000 | |
50 | A | A | -0.8885 | |
51 | G | A | -0.8309 | |
52 | T | A | 0.0000 | |
53 | D | A | -0.7281 | |
54 | P | A | -0.1285 | |
55 | M | A | 0.3733 | |
56 | A | A | -0.4994 | |
57 | N | A | -1.4696 | |
58 | Q | A | -1.4235 | |
59 | A | A | -1.2424 | |
60 | A | A | -1.8423 | |
61 | R | A | -3.1927 | |
62 | D | A | -3.7963 | |
63 | R | A | -3.6313 | |
64 | D | A | -3.1506 | |
65 | G | A | -2.4132 | |
66 | T | A | -2.2092 | |
67 | G | A | -1.5362 | |
68 | R | A | -1.1615 | |
69 | F | A | 0.0000 | |
70 | T | A | -0.7505 | |
71 | I | A | 0.0000 | |
72 | S | A | -0.8443 | |
73 | R | A | -1.2880 | |
74 | D | A | -2.0774 | |
75 | N | A | -2.2361 | |
76 | S | A | -1.9435 | |
77 | K | A | -2.5253 | |
78 | N | A | -1.5624 | |
79 | T | A | 0.0000 | |
80 | L | A | 0.0000 | |
81 | Y | A | -0.7082 | |
82 | L | A | 0.0000 | |
83 | Q | A | -1.3025 | |
84 | M | A | 0.0000 | |
85 | N | A | -1.3800 | |
86 | S | A | -1.2958 | |
87 | L | A | 0.0000 | |
88 | R | A | -2.2484 | |
89 | A | A | -1.5676 | |
90 | E | A | -2.0040 | |
91 | D | A | 0.0000 | |
92 | T | A | -0.2961 | |
93 | A | A | 0.0000 | |
94 | V | A | 0.9313 | |
95 | Y | A | 0.0000 | |
96 | Y | A | 0.0922 | |
97 | C | A | 0.0000 | |
98 | A | A | 0.0000 | |
99 | I | A | 0.0000 | |
100 | G | A | 0.0000 | |
101 | P | A | -0.3151 | |
102 | M | A | 0.3460 | |
103 | V | A | 0.6262 | |
104 | I | A | 1.8477 | |
105 | T | A | 0.1076 | |
106 | Q | A | -1.4738 | |
107 | E | A | -2.4979 | |
108 | E | A | -2.6064 | |
109 | L | A | -1.4508 | |
110 | D | A | -0.9822 | |
111 | Y | A | -0.3981 | |
112 | Y | A | -0.6521 | |
113 | R | A | -1.9636 | |
114 | S | A | -1.3565 | |
115 | T | A | -1.0159 | |
116 | A | A | 0.0000 | |
117 | G | A | 0.0000 | |
118 | Q | A | -1.1712 | |
119 | G | A | -0.1439 | |
120 | T | A | 0.6269 | |
121 | L | A | 1.7467 | |
122 | V | A | 0.0000 | |
123 | T | A | 0.4071 | |
124 | V | A | 0.0000 | |
125 | S | A | -0.6834 |