| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGSPLSGAYMHWVRQAPGKGLEWVGLISASLGGSTATIYDPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARLYVDSAGTLVGVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
L: DIQMTQSPSSLSASVGDRVTITCKLSSPGSGTILWYQQKPGKAPKVLIYGKVSGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCAYMHRGITFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:10)
[INFO] Main: Simulation completed successfully. (00:08:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1967 | |
| 2 | V | H | -1.5121 | |
| 3 | Q | H | -1.3711 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1679 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3249 | |
| 8 | G | H | -0.8588 | |
| 9 | G | H | -0.5090 | |
| 10 | G | H | -0.3286 | |
| 11 | L | H | -0.1042 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.6877 | |
| 14 | P | H | -1.8336 | |
| 15 | G | H | -1.4981 | |
| 16 | G | H | -1.2062 | |
| 17 | S | H | -1.3906 | |
| 18 | L | H | -1.2132 | |
| 19 | R | H | -2.1145 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.3805 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.0582 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.1078 | |
| 26 | G | H | -1.4470 | |
| 27 | S | H | -0.9557 | |
| 28 | P | H | -0.9945 | |
| 29 | L | H | 0.0000 | |
| 30 | S | H | -0.3748 | |
| 31 | G | H | 0.2375 | |
| 32 | A | H | 0.0000 | |
| 33 | Y | H | 0.9719 | |
| 34 | M | H | 0.0000 | |
| 35 | H | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.6920 | |
| 40 | A | H | -1.1515 | |
| 41 | P | H | -0.9830 | |
| 42 | G | H | -1.4831 | |
| 43 | K | H | -2.2971 | |
| 44 | G | H | -1.4817 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.7326 | |
| 47 | W | H | 0.0000 | |
| 48 | V | H | 0.0000 | |
| 49 | G | H | 0.0000 | |
| 50 | L | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | S | H | 0.0000 | |
| 53 | A | H | 0.0000 | |
| 54 | S | H | 0.3115 | |
| 55 | L | H | 0.9417 | |
| 56 | G | H | -0.1106 | |
| 57 | G | H | -0.6169 | |
| 58 | S | H | -0.3467 | |
| 59 | T | H | -0.2427 | |
| 60 | A | H | 0.0986 | |
| 61 | T | H | 0.2588 | |
| 62 | I | H | 0.0586 | |
| 63 | Y | H | -0.9911 | |
| 64 | D | H | -1.6495 | |
| 65 | P | H | -1.9048 | |
| 66 | K | H | -2.6041 | |
| 67 | F | H | 0.0000 | |
| 68 | Q | H | -2.6650 | |
| 69 | D | H | -2.9885 | |
| 70 | R | H | -2.1517 | |
| 71 | A | H | 0.0000 | |
| 72 | T | H | -0.9756 | |
| 73 | I | H | 0.0000 | |
| 74 | S | H | -0.4269 | |
| 75 | A | H | -1.0170 | |
| 76 | D | H | -1.9175 | |
| 77 | N | H | -2.4490 | |
| 78 | S | H | -1.9670 | |
| 79 | K | H | -2.5762 | |
| 80 | N | H | -1.9807 | |
| 81 | T | H | 0.0000 | |
| 82 | A | H | 0.0000 | |
| 83 | Y | H | 0.0000 | |
| 84 | L | H | 0.0000 | |
| 85 | Q | H | -1.2749 | |
| 86 | M | H | 0.0000 | |
| 87 | N | H | -1.7506 | |
| 88 | S | H | -1.4785 | |
| 89 | L | H | 0.0000 | |
| 90 | R | H | -2.5730 | |
| 91 | A | H | -1.8553 | |
| 92 | E | H | -2.3152 | |
| 93 | D | H | 0.0000 | |
| 94 | T | H | -0.7828 | |
| 95 | A | H | 0.0000 | |
| 96 | V | H | 0.1603 | |
| 97 | Y | H | 0.0000 | |
| 98 | Y | H | 0.0000 | |
| 99 | C | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | R | H | 0.0000 | |
| 102 | L | H | 0.9902 | |
| 103 | Y | H | 1.2563 | |
| 104 | V | H | 1.5455 | |
| 105 | D | H | 0.2170 | |
| 106 | S | H | -0.1873 | |
| 107 | A | H | -0.1692 | |
| 108 | G | H | -0.0527 | |
| 109 | T | H | 0.0313 | |
| 110 | L | H | 0.0000 | |
| 111 | V | H | 0.8085 | |
| 112 | G | H | 0.4566 | |
| 113 | V | H | -0.3462 | |
| 114 | W | H | -0.3575 | |
| 115 | G | H | 0.0000 | |
| 116 | Q | H | -1.2628 | |
| 117 | G | H | 0.0000 | |
| 118 | T | H | 0.0280 | |
| 119 | L | H | 0.0857 | |
| 120 | V | H | 0.0000 | |
| 121 | T | H | -0.5036 | |
| 122 | V | H | 0.0000 | |
| 123 | S | H | -1.0092 | |
| 124 | S | H | -0.7143 | |
| 125 | A | H | -0.4741 | |
| 126 | S | H | -0.5847 | |
| 127 | T | H | -0.7845 | |
| 128 | K | H | -1.2794 | |
| 129 | G | H | -1.3682 | |
| 130 | P | H | -0.6164 | |
| 131 | S | H | -0.4215 | |
| 132 | V | H | 0.0000 | |
| 133 | F | H | 0.0000 | |
| 134 | P | H | -1.1257 | |
| 135 | L | H | 0.0000 | |
| 136 | A | H | -1.1033 | |
| 137 | P | H | 0.0000 | |
| 138 | S | H | -0.8696 | |
| 139 | S | H | -0.6316 | |
| 140 | K | H | -1.1307 | |
| 141 | S | H | 0.0000 | |
| 142 | T | H | -0.7365 | |
| 143 | S | H | -0.7835 | |
| 144 | G | H | -0.8372 | |
| 145 | G | H | -0.8979 | |
| 146 | T | H | -0.6049 | |
| 147 | A | H | 0.0000 | |
| 148 | A | H | 0.0000 | |
| 149 | L | H | 0.0000 | |
| 150 | G | H | 0.0000 | |
| 151 | C | H | 0.0000 | |
| 152 | L | H | 0.0000 | |
| 153 | V | H | 0.0000 | |
| 154 | K | H | 0.0000 | |
| 155 | D | H | -0.3499 | |
| 156 | Y | H | 0.0000 | |
| 157 | F | H | 0.0000 | |
| 158 | P | H | 0.0000 | |
| 159 | E | H | -0.4991 | |
| 160 | P | H | -0.6130 | |
| 161 | V | H | -0.7139 | |
| 162 | T | H | -0.6333 | |
| 163 | V | H | -0.4108 | |
| 164 | S | H | -0.3979 | |
| 165 | W | H | 0.0000 | |
| 166 | N | H | -0.7087 | |
| 167 | S | H | -0.6276 | |
| 168 | G | H | -0.4900 | |
| 169 | A | H | -0.2484 | |
| 170 | L | H | -0.0189 | |
| 171 | T | H | -0.1882 | |
| 172 | S | H | -0.1926 | |
| 173 | G | H | -0.2280 | |
| 174 | V | H | 0.1272 | |
| 175 | H | H | -0.2887 | |
| 176 | T | H | -0.1639 | |
| 177 | F | H | 0.0000 | |
| 178 | P | H | -0.2215 | |
| 179 | A | H | 0.2837 | |
| 180 | V | H | 0.5823 | |
| 181 | L | H | 1.1668 | |
| 182 | Q | H | 0.2955 | |
| 183 | S | H | -0.1047 | |
| 184 | S | H | -0.2119 | |
| 185 | G | H | 0.0422 | |
| 186 | L | H | 0.1435 | |
| 187 | Y | H | 0.4939 | |
| 188 | S | H | 0.0000 | |
| 189 | L | H | 0.0000 | |
| 190 | S | H | 0.0000 | |
| 191 | S | H | 0.0000 | |
| 192 | V | H | 0.0000 | |
| 193 | V | H | 0.0000 | |
| 194 | T | H | -0.1309 | |
| 195 | V | H | 0.0000 | |
| 196 | P | H | -0.5206 | |
| 197 | S | H | -0.5559 | |
| 198 | S | H | -0.5425 | |
| 199 | S | H | -0.5670 | |
| 200 | L | H | -0.6863 | |
| 201 | G | H | -1.0189 | |
| 202 | T | H | -0.7006 | |
| 203 | Q | H | -1.1553 | |
| 204 | T | H | -1.1006 | |
| 205 | Y | H | 0.0000 | |
| 206 | I | H | -1.1221 | |
| 207 | C | H | 0.0000 | |
| 208 | N | H | -1.3959 | |
| 209 | V | H | 0.0000 | |
| 210 | N | H | -2.0557 | |
| 211 | H | H | 0.0000 | |
| 212 | K | H | -2.7576 | |
| 213 | P | H | -1.6098 | |
| 214 | S | H | -1.8649 | |
| 215 | N | H | -2.5977 | |
| 216 | T | H | -2.0952 | |
| 217 | K | H | -2.6971 | |
| 218 | V | H | -1.5027 | |
| 219 | D | H | -2.2430 | |
| 220 | K | H | -1.9574 | |
| 221 | K | H | -2.3941 | |
| 222 | V | H | 0.0000 | |
| 223 | E | H | -2.7345 | |
| 224 | P | H | -1.5943 | |
| 225 | K | H | -1.8924 | |
| 226 | S | H | -1.4485 | |
| 227 | C | H | -1.0813 | |
| 228 | D | H | -2.5480 | |
| 229 | K | H | -2.7543 | |
| 230 | T | H | -1.7555 | |
| 231 | H | H | -1.7788 | |
| 232 | T | H | -0.8237 | |
| 1 | D | L | -1.9144 | |
| 2 | I | L | -1.2357 | |
| 3 | Q | L | -1.7605 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.1228 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6693 | |
| 8 | P | L | -0.5638 | |
| 9 | S | L | -0.7551 | |
| 10 | S | L | -0.7706 | |
| 11 | L | L | -0.6133 | |
| 12 | S | L | -1.0275 | |
| 13 | A | L | -1.0824 | |
| 14 | S | L | -0.9317 | |
| 15 | V | L | -0.2116 | |
| 16 | G | L | -0.8563 | |
| 17 | D | L | -1.8676 | |
| 18 | R | L | -2.3632 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6647 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7004 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -1.8941 | |
| 25 | L | L | 0.0000 | |
| 26 | S | L | -1.2974 | |
| 27 | S | L | -1.0852 | |
| 28 | P | L | -0.9183 | |
| 29 | G | L | -0.7539 | |
| 30 | S | L | -0.6684 | |
| 31 | G | L | -0.9549 | |
| 32 | T | L | -0.2044 | |
| 33 | I | L | 0.0186 | |
| 34 | L | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | K | L | -1.7675 | |
| 40 | P | L | -1.4520 | |
| 41 | G | L | -1.7494 | |
| 42 | K | L | -2.5182 | |
| 43 | A | L | -1.6202 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -1.3113 | |
| 46 | V | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | -0.1428 | |
| 50 | G | L | -1.0958 | |
| 51 | K | L | -1.8864 | |
| 52 | V | L | -0.8145 | |
| 53 | S | L | -0.7394 | |
| 54 | G | L | -0.6938 | |
| 55 | V | L | -0.5032 | |
| 56 | P | L | -0.5267 | |
| 57 | S | L | -0.7240 | |
| 58 | R | L | -0.7945 | |
| 59 | F | L | 0.0000 | |
| 60 | S | L | -0.8327 | |
| 61 | G | L | -0.8508 | |
| 62 | S | L | -0.8686 | |
| 63 | G | L | -1.2288 | |
| 64 | S | L | -1.1199 | |
| 65 | G | L | -1.2310 | |
| 66 | T | L | -1.4590 | |
| 67 | D | L | -2.0391 | |
| 68 | Y | L | -1.1508 | |
| 69 | T | L | -0.7563 | |
| 70 | L | L | 0.0000 | |
| 71 | T | L | -0.6725 | |
| 72 | I | L | 0.0000 | |
| 73 | S | L | -1.3095 | |
| 74 | S | L | -1.2061 | |
| 75 | L | L | 0.0000 | |
| 76 | Q | L | -1.0438 | |
| 77 | P | L | -1.5226 | |
| 78 | E | L | -1.9907 | |
| 79 | D | L | 0.0000 | |
| 80 | F | L | 0.0000 | |
| 81 | A | L | 0.0000 | |
| 82 | T | L | -0.7178 | |
| 83 | Y | L | 0.0000 | |
| 84 | Y | L | 0.0000 | |
| 85 | C | L | 0.0000 | |
| 86 | A | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | M | L | -0.7763 | |
| 89 | H | L | -1.8644 | |
| 90 | R | L | -2.2315 | |
| 91 | G | L | -1.1801 | |
| 92 | I | L | 0.0000 | |
| 93 | T | L | -0.8506 | |
| 94 | F | L | -0.2557 | |
| 95 | G | L | 0.0000 | |
| 96 | Q | L | -1.4869 | |
| 97 | G | L | 0.0000 | |
| 98 | T | L | 0.0000 | |
| 99 | K | L | -1.2733 | |
| 100 | V | L | 0.0000 | |
| 101 | E | L | -1.2568 | |
| 102 | I | L | 0.0000 | |
| 103 | K | L | -1.4541 | |
| 104 | R | L | -0.8830 | |
| 105 | T | L | -0.1629 | |
| 106 | V | L | 0.1478 | |
| 107 | A | L | -0.1459 | |
| 108 | A | L | -0.1637 | |
| 109 | P | L | 0.0000 | |
| 110 | S | L | -0.2527 | |
| 111 | V | L | 0.0000 | |
| 112 | F | L | 0.0000 | |
| 113 | I | L | 0.0000 | |
| 114 | F | L | 0.0000 | |
| 115 | P | L | -0.5381 | |
| 116 | P | L | 0.0000 | |
| 117 | S | L | 0.0000 | |
| 118 | D | L | -2.9987 | |
| 119 | E | L | -2.8563 | |
| 120 | Q | L | 0.0000 | |
| 121 | L | L | -2.2174 | |
| 122 | K | L | -2.8009 | |
| 123 | S | L | -1.7644 | |
| 124 | G | L | -1.2858 | |
| 125 | T | L | -0.9744 | |
| 126 | A | L | 0.0000 | |
| 127 | S | L | 0.0000 | |
| 128 | V | L | 0.0000 | |
| 129 | V | L | 0.0000 | |
| 130 | C | L | 0.0000 | |
| 131 | L | L | 0.0000 | |
| 132 | L | L | 0.0000 | |
| 133 | N | L | 0.0000 | |
| 134 | N | L | -0.8740 | |
| 135 | F | L | 0.0000 | |
| 136 | Y | L | 0.0000 | |
| 137 | P | L | -1.8223 | |
| 138 | R | L | -3.1295 | |
| 139 | E | L | -3.3021 | |
| 140 | A | L | -2.3709 | |
| 141 | K | L | -2.4301 | |
| 142 | V | L | -0.9935 | |
| 143 | Q | L | -0.5461 | |
| 144 | W | L | 0.0000 | |
| 145 | K | L | -0.4957 | |
| 146 | V | L | 0.0000 | |
| 147 | D | L | -1.7428 | |
| 148 | N | L | -1.4518 | |
| 149 | A | L | -0.2690 | |
| 150 | L | L | 0.6595 | |
| 151 | Q | L | -0.2082 | |
| 152 | S | L | -0.4159 | |
| 153 | G | L | -0.8741 | |
| 154 | N | L | -0.7892 | |
| 155 | S | L | -0.9736 | |
| 156 | Q | L | -1.1155 | |
| 157 | E | L | -1.3698 | |
| 158 | S | L | -0.7065 | |
| 159 | V | L | -0.6324 | |
| 160 | T | L | -1.0043 | |
| 161 | E | L | -1.9701 | |
| 162 | Q | L | 0.0000 | |
| 163 | D | L | -1.8267 | |
| 164 | S | L | -2.1057 | |
| 165 | K | L | -2.4244 | |
| 166 | D | L | -1.5736 | |
| 167 | S | L | 0.0000 | |
| 168 | T | L | 0.0000 | |
| 169 | Y | L | 0.0000 | |
| 170 | S | L | 0.0000 | |
| 171 | L | L | 0.0000 | |
| 172 | S | L | 0.0000 | |
| 173 | S | L | 0.0000 | |
| 174 | T | L | -0.5485 | |
| 175 | L | L | 0.0000 | |
| 176 | T | L | -0.3589 | |
| 177 | L | L | -0.5257 | |
| 178 | S | L | -1.0562 | |
| 179 | K | L | -1.8438 | |
| 180 | A | L | -1.6370 | |
| 181 | D | L | -2.0662 | |
| 182 | Y | L | 0.0000 | |
| 183 | E | L | -3.2163 | |
| 184 | K | L | -3.3336 | |
| 185 | H | L | -2.7063 | |
| 186 | K | L | -2.9810 | |
| 187 | V | L | -1.5877 | |
| 188 | Y | L | 0.0000 | |
| 189 | A | L | 0.0000 | |
| 190 | C | L | 0.0000 | |
| 191 | E | L | -0.5359 | |
| 192 | V | L | 0.0000 | |
| 193 | T | L | -1.1829 | |
| 194 | H | L | 0.0000 | |
| 195 | Q | L | -1.8177 | |
| 196 | G | L | -0.5026 | |
| 197 | L | L | -0.2694 | |
| 198 | S | L | -0.4635 | |
| 199 | S | L | -0.4184 | |
| 200 | P | L | -0.5254 | |
| 201 | V | L | 0.1273 | |
| 202 | T | L | -0.3007 | |
| 203 | K | L | -0.6689 | |
| 204 | S | L | -0.6581 | |
| 205 | F | L | 0.0000 | |
| 206 | N | L | -1.6639 | |
| 207 | R | L | -2.2812 | |
| 208 | G | L | -1.7784 | |
| 209 | E | L | -1.9717 | |
| 210 | C | L | -0.7486 |