Project name: query_structure

Status: done

Started: 2026-03-16 23:07:21
Settings
Chain sequence(s) A: EGCVYLPCFTAPLGCSCSSKVCYRNGIPCG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:12)
Show buried residues

Minimal score value
-1.4832
Maximal score value
2.3597
Average score
0.3461
Total score value
10.3821

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -0.2887
2 G A 0.0371
3 C A 0.9557
4 V A 1.2769
5 Y A 2.1120
6 L A 2.3597
7 P A 1.3593
8 C A 0.0000
9 F A 2.1003
10 T A 1.1279
11 A A 0.8555
12 P A 0.7525
13 L A 1.3491
14 G A 0.0003
15 C A 0.0000
16 S A -0.0178
17 C A 0.3056
18 S A -0.3025
19 S A -0.5891
20 K A -0.8583
21 V A -0.0284
22 C A 0.0000
23 Y A -0.1660
24 R A -1.0365
25 N A -1.4832
26 G A -0.4373
27 I A 1.0252
28 P A 0.2346
29 C A 0.1812
30 G A -0.4430
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Laboratory of Theory of Biopolymers 2018