| Chain sequence(s) |
H: SVEESGGRLVAPGTPLTLTCTVSGIDLSTYGMGWVRQAPGKGLEYIGIIDSGSTYYANWAKGRFTISKTSTTVDLKMTSLTTEDTATYFCARDRDPSSSGYYFKMWGPGTLVTVSL
L: ALVMTQTPSSVSAAVGGTVTINCQASQSIGSYLAWYQQKPGQPPRLLIYGASNLESGVPSRFKGSGSGTEFTLTISDLECDDAATYYCQTAFYIFSSDNAFGGGTEVVVK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:41)
[INFO] Main: Simulation completed successfully. (00:01:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | S | H | -0.7833 | |
| 4 | V | H | 0.0000 | |
| 5 | E | H | -2.0089 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.8308 | |
| 8 | G | H | -0.4742 | |
| 9 | G | H | -0.2442 | |
| 11 | R | H | -0.5817 | |
| 12 | L | H | 1.0919 | |
| 13 | V | H | 0.0000 | |
| 14 | A | H | 0.6593 | |
| 15 | P | H | 0.0908 | |
| 16 | G | H | -0.6872 | |
| 17 | T | H | -0.4550 | |
| 18 | P | H | -0.6522 | |
| 19 | L | H | 0.0000 | |
| 20 | T | H | -0.8245 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.8847 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -0.8409 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.1128 | |
| 27 | G | H | -0.9478 | |
| 28 | I | H | -1.1025 | |
| 29 | D | H | -1.9251 | |
| 30 | L | H | 0.0000 | |
| 35 | S | H | -1.1201 | |
| 36 | T | H | -0.9869 | |
| 37 | Y | H | -0.9403 | |
| 38 | G | H | -0.7286 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7826 | |
| 45 | A | H | -1.1395 | |
| 46 | P | H | -0.9292 | |
| 47 | G | H | -1.5252 | |
| 48 | K | H | -2.2738 | |
| 49 | G | H | -1.4083 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9119 | |
| 52 | Y | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | I | H | 0.1314 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -1.2825 | |
| 58 | S | H | -1.1092 | |
| 63 | G | H | -1.0253 | |
| 64 | S | H | -0.6374 | |
| 65 | T | H | -0.1384 | |
| 66 | Y | H | 0.8863 | |
| 67 | Y | H | 0.0656 | |
| 68 | A | H | 0.0000 | |
| 69 | N | H | -1.2225 | |
| 70 | W | H | -0.6567 | |
| 71 | A | H | 0.0000 | |
| 72 | K | H | -2.1503 | |
| 74 | G | H | -1.6195 | |
| 75 | R | H | -1.3731 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8277 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.8613 | |
| 80 | K | H | -1.0717 | |
| 81 | T | H | -0.5852 | |
| 84 | S | H | -0.7520 | |
| 85 | T | H | -0.7675 | |
| 86 | T | H | -0.6914 | |
| 87 | V | H | 0.0000 | |
| 88 | D | H | -1.0123 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.4661 | |
| 91 | M | H | 0.0000 | |
| 92 | T | H | -0.8328 | |
| 93 | S | H | -0.6232 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -0.8744 | |
| 96 | T | H | -0.9094 | |
| 97 | E | H | -1.8771 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.2667 | |
| 100 | A | H | 0.0000 | |
| 101 | T | H | 0.4353 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.4602 | |
| 107 | D | H | 0.0000 | |
| 108 | R | H | -1.4199 | |
| 109 | D | H | -1.3829 | |
| 110 | P | H | -0.9064 | |
| 111 | S | H | -0.6799 | |
| 111A | S | H | -0.2919 | |
| 112A | S | H | 0.0605 | |
| 112 | G | H | 0.0000 | |
| 113 | Y | H | 0.6109 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | K | H | -1.1174 | |
| 117 | M | H | -0.6039 | |
| 118 | W | H | -0.6544 | |
| 119 | G | H | 0.0000 | |
| 120 | P | H | -0.8586 | |
| 121 | G | H | -0.4544 | |
| 122 | T | H | -0.0017 | |
| 123 | L | H | 1.1639 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3948 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | 0.6982 | |
| 128 | L | H | 1.6778 | |
| 1 | A | L | 0.3099 | |
| 2 | L | L | 0.7323 | |
| 3 | V | L | 1.3939 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.3388 | |
| 6 | Q | L | -0.6916 | |
| 7 | T | L | -0.6666 | |
| 8 | P | L | -0.5482 | |
| 9 | S | L | -0.7156 | |
| 10 | S | L | -0.4535 | |
| 11 | V | L | 0.0258 | |
| 12 | S | L | 0.0126 | |
| 13 | A | L | -0.0771 | |
| 14 | A | L | -0.1286 | |
| 15 | V | L | 0.3285 | |
| 16 | G | L | -0.7874 | |
| 17 | G | L | -0.7612 | |
| 18 | T | L | -0.6873 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.3209 | |
| 21 | I | L | 0.0000 | |
| 22 | N | L | -1.0511 | |
| 23 | C | L | 0.0000 | |
| 24 | Q | L | -1.5251 | |
| 25 | A | L | -0.7746 | |
| 26 | S | L | -0.4607 | |
| 27 | Q | L | -1.3208 | |
| 28 | S | L | -1.1056 | |
| 29 | I | L | 0.0000 | |
| 36 | G | L | -0.5214 | |
| 37 | S | L | -0.1525 | |
| 38 | Y | L | 0.6004 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.6081 | |
| 46 | P | L | -1.1372 | |
| 47 | G | L | -1.3353 | |
| 48 | Q | L | -1.9223 | |
| 49 | P | L | -1.2614 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.7587 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1828 | |
| 56 | G | L | -0.4459 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -1.2858 | |
| 66 | N | L | -1.5049 | |
| 67 | L | L | -0.7296 | |
| 68 | E | L | -0.5372 | |
| 69 | S | L | -0.5220 | |
| 70 | G | L | -0.5095 | |
| 71 | V | L | -0.3780 | |
| 72 | P | L | -0.5352 | |
| 74 | S | L | -0.9224 | |
| 75 | R | L | -1.4109 | |
| 76 | F | L | 0.0000 | |
| 77 | K | L | -2.0571 | |
| 78 | G | L | -1.2854 | |
| 79 | S | L | -1.2627 | |
| 80 | G | L | -1.1894 | |
| 83 | S | L | -1.0297 | |
| 84 | G | L | -1.2066 | |
| 85 | T | L | -1.7109 | |
| 86 | E | L | -2.4786 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -1.1182 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.9717 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4618 | |
| 93 | D | L | -1.9908 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.4986 | |
| 96 | C | L | -0.6432 | |
| 97 | D | L | -1.6288 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -0.7085 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.6695 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | T | L | 0.0000 | |
| 107 | A | L | 0.0000 | |
| 108 | F | L | 2.3083 | |
| 109 | Y | L | 2.5980 | |
| 110 | I | L | 2.9083 | |
| 112 | F | L | 2.7625 | |
| 113 | S | L | 0.8356 | |
| 114 | S | L | 1.0343 | |
| 115 | D | L | 0.5244 | |
| 116 | N | L | 0.5334 | |
| 117 | A | L | 0.3396 | |
| 118 | F | L | 0.1155 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.8408 | |
| 121 | G | L | -0.9530 | |
| 122 | T | L | 0.0000 | |
| 123 | E | L | -1.1380 | |
| 124 | V | L | 0.0000 | |
| 125 | V | L | 0.4758 | |
| 126 | V | L | -0.0933 | |
| 127 | K | L | -0.9467 |