| Chain sequence(s) |
H: QVQLVESGGGVVQPGGSLRLSCAASGFTFSIYAMGWARQAPGKGLEWVSGIYSDGSTYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAPGGSTWSPNALDARGQGTLVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3128 | |
| 2 | V | H | -0.9452 | |
| 3 | Q | H | -1.0895 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.6537 | |
| 6 | E | H | 0.1443 | |
| 7 | S | H | -0.2838 | |
| 8 | G | H | -0.8374 | |
| 9 | G | H | 0.1751 | |
| 11 | G | H | 1.0482 | |
| 12 | V | H | 1.6970 | |
| 13 | V | H | 0.0787 | |
| 14 | Q | H | -1.3206 | |
| 15 | P | H | -1.6964 | |
| 16 | G | H | -1.5276 | |
| 17 | G | H | -1.1119 | |
| 18 | S | H | -1.4322 | |
| 19 | L | H | -0.9239 | |
| 20 | R | H | -1.9505 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.4389 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.3358 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8450 | |
| 27 | G | H | -0.8731 | |
| 28 | F | H | 0.1017 | |
| 29 | T | H | 0.5167 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | 0.4140 | |
| 36 | I | H | 1.9259 | |
| 37 | Y | H | 1.1314 | |
| 38 | A | H | 0.4485 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | A | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.1555 | |
| 45 | A | H | 0.0000 | |
| 46 | P | H | -1.0491 | |
| 47 | G | H | -1.0080 | |
| 48 | K | H | -1.1756 | |
| 49 | G | H | -0.4458 | |
| 50 | L | H | 0.9116 | |
| 51 | E | H | 0.2286 | |
| 52 | W | H | 0.6511 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | G | H | 0.5505 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | 0.5714 | |
| 58 | S | H | -0.2077 | |
| 59 | D | H | -1.6080 | |
| 63 | G | H | -1.1780 | |
| 64 | S | H | -0.3661 | |
| 65 | T | H | 0.3631 | |
| 66 | Y | H | 0.9200 | |
| 67 | Y | H | -0.1611 | |
| 68 | A | H | -0.8920 | |
| 69 | D | H | -2.2011 | |
| 70 | S | H | -1.5520 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.0066 | |
| 74 | G | H | -1.6027 | |
| 75 | R | H | -1.5338 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7167 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4428 | |
| 80 | R | H | -1.1467 | |
| 81 | D | H | -1.8679 | |
| 82 | N | H | -2.4652 | |
| 83 | S | H | -1.9741 | |
| 84 | K | H | -2.7087 | |
| 85 | N | H | -2.2604 | |
| 86 | T | H | -1.3015 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.5477 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.3708 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -2.0252 | |
| 93 | S | H | -1.5183 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3590 | |
| 96 | A | H | -1.6944 | |
| 97 | E | H | -2.2246 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3612 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.9597 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.2359 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | -0.6325 | |
| 106 | P | H | 0.0000 | |
| 107 | G | H | -0.1065 | |
| 108 | G | H | -0.1792 | |
| 109 | S | H | 0.1394 | |
| 110 | T | H | 0.2862 | |
| 111 | W | H | 0.6920 | |
| 112A | S | H | -0.2108 | |
| 112 | P | H | -0.5621 | |
| 113 | N | H | -1.2936 | |
| 114 | A | H | -0.8374 | |
| 115 | L | H | -0.8197 | |
| 116 | D | H | -1.8976 | |
| 117 | A | H | -1.4984 | |
| 118 | R | H | -1.7471 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0300 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.5960 | |
| 123 | L | H | 1.6524 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.5148 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4366 | |
| 128 | S | H | -0.4645 |