Project name: 2f061ff2d14bc9a

Status: done

Started: 2026-06-27 15:14:15
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Chain sequence(s) A: FEFEFKFK
C: FEFEFKFK
B: FEFEFKFK
E: FEFEFKFK
D: FEFEFKFK
G: FEFEFKFK
F: FEFEFKFK
I: FEFEFKFK
H: FEFEFKFK
K: FEFEFKFK
J: FEFEFKFK
L: FEFEFKFK
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:40)
Show buried residues

Minimal score value
-3.2222
Maximal score value
2.0425
Average score
-0.4226
Total score value
-40.569

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A -1.1085
2 E A -2.7426
3 F A 0.0000
4 E A -3.2222
5 F A 0.0000
6 K A -3.0052
7 F A 0.0000
8 K A -2.1834
1 F B 0.4735
2 E B -1.6990
3 F B 0.0000
4 E B -3.1466
5 F B 0.0000
6 K B -2.5602
7 F B 0.0000
8 K B -2.6722
1 F C -0.7613
2 E C -1.5847
3 F C -0.9855
4 E C -2.0482
5 F C 0.0000
6 K C -2.8466
7 F C 0.0000
8 K C -2.2838
1 F D 0.7882
2 E D -1.7284
3 F D -1.4099
4 E D -2.6406
5 F D -1.1507
6 K D -1.7238
7 F D -0.1788
8 K D -1.6249
1 F E 0.9714
2 E E -1.3997
3 F E -0.3464
4 E E -0.9310
5 F E 0.9241
6 K E 0.2737
7 F E 1.0975
8 K E -0.7044
1 F F 1.7524
2 E F 0.3086
3 F F 0.6837
4 E F 0.0647
5 F F 0.5626
6 K F -0.4686
7 F F -0.1605
8 K F -1.2266
1 F G 1.7679
2 E G 0.0000
3 F G 0.6489
4 E G 0.0000
5 F G 0.5945
6 K G 0.0245
7 F G 0.8105
8 K G -0.0083
1 F H 1.7136
2 E H 0.2508
3 F H 0.1280
4 E H 0.0000
5 F H 0.8418
6 K H 0.0000
7 F H 1.0497
8 K H -0.1448
1 F I 1.8344
2 E I 0.0000
3 F I 1.5818
4 E I 0.0000
5 F I 1.0619
6 K I -0.4897
7 F I -0.1114
8 K I -1.0645
1 F J 1.1765
2 E J -1.0049
3 F J -0.4927
4 E J -0.8015
5 F J 1.7896
6 K J 0.0000
7 F J 2.0425
8 K J -0.0324
1 F K 0.9335
2 E K -1.2340
3 F K -0.1139
4 E K -1.5856
5 F K 0.4355
6 K K -1.4256
7 F K -0.0785
8 K K -1.5305
1 F L 1.0857
2 E L -1.1676
3 F L 0.0000
4 E L -2.3499
5 F L -1.0639
6 K L -2.5384
7 F L 0.0000
8 K L -2.4586
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Laboratory of Theory of Biopolymers 2018