| Chain sequence(s) |
A: FEFEFKFK
C: FEFEFKFK B: FEFEFKFK E: FEFEFKFK D: FEFEFKFK G: FEFEFKFK F: FEFEFKFK I: FEFEFKFK H: FEFEFKFK K: FEFEFKFK J: FEFEFKFK L: FEFEFKFK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:38)
[INFO] Main: Simulation completed successfully. (00:09:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | -1.1085 | |
| 2 | E | A | -2.7426 | |
| 3 | F | A | 0.0000 | |
| 4 | E | A | -3.2222 | |
| 5 | F | A | 0.0000 | |
| 6 | K | A | -3.0052 | |
| 7 | F | A | 0.0000 | |
| 8 | K | A | -2.1834 | |
| 1 | F | B | 0.4735 | |
| 2 | E | B | -1.6990 | |
| 3 | F | B | 0.0000 | |
| 4 | E | B | -3.1466 | |
| 5 | F | B | 0.0000 | |
| 6 | K | B | -2.5602 | |
| 7 | F | B | 0.0000 | |
| 8 | K | B | -2.6722 | |
| 1 | F | C | -0.7613 | |
| 2 | E | C | -1.5847 | |
| 3 | F | C | -0.9855 | |
| 4 | E | C | -2.0482 | |
| 5 | F | C | 0.0000 | |
| 6 | K | C | -2.8466 | |
| 7 | F | C | 0.0000 | |
| 8 | K | C | -2.2838 | |
| 1 | F | D | 0.7882 | |
| 2 | E | D | -1.7284 | |
| 3 | F | D | -1.4099 | |
| 4 | E | D | -2.6406 | |
| 5 | F | D | -1.1507 | |
| 6 | K | D | -1.7238 | |
| 7 | F | D | -0.1788 | |
| 8 | K | D | -1.6249 | |
| 1 | F | E | 0.9714 | |
| 2 | E | E | -1.3997 | |
| 3 | F | E | -0.3464 | |
| 4 | E | E | -0.9310 | |
| 5 | F | E | 0.9241 | |
| 6 | K | E | 0.2737 | |
| 7 | F | E | 1.0975 | |
| 8 | K | E | -0.7044 | |
| 1 | F | F | 1.7524 | |
| 2 | E | F | 0.3086 | |
| 3 | F | F | 0.6837 | |
| 4 | E | F | 0.0647 | |
| 5 | F | F | 0.5626 | |
| 6 | K | F | -0.4686 | |
| 7 | F | F | -0.1605 | |
| 8 | K | F | -1.2266 | |
| 1 | F | G | 1.7679 | |
| 2 | E | G | 0.0000 | |
| 3 | F | G | 0.6489 | |
| 4 | E | G | 0.0000 | |
| 5 | F | G | 0.5945 | |
| 6 | K | G | 0.0245 | |
| 7 | F | G | 0.8105 | |
| 8 | K | G | -0.0083 | |
| 1 | F | H | 1.7136 | |
| 2 | E | H | 0.2508 | |
| 3 | F | H | 0.1280 | |
| 4 | E | H | 0.0000 | |
| 5 | F | H | 0.8418 | |
| 6 | K | H | 0.0000 | |
| 7 | F | H | 1.0497 | |
| 8 | K | H | -0.1448 | |
| 1 | F | I | 1.8344 | |
| 2 | E | I | 0.0000 | |
| 3 | F | I | 1.5818 | |
| 4 | E | I | 0.0000 | |
| 5 | F | I | 1.0619 | |
| 6 | K | I | -0.4897 | |
| 7 | F | I | -0.1114 | |
| 8 | K | I | -1.0645 | |
| 1 | F | J | 1.1765 | |
| 2 | E | J | -1.0049 | |
| 3 | F | J | -0.4927 | |
| 4 | E | J | -0.8015 | |
| 5 | F | J | 1.7896 | |
| 6 | K | J | 0.0000 | |
| 7 | F | J | 2.0425 | |
| 8 | K | J | -0.0324 | |
| 1 | F | K | 0.9335 | |
| 2 | E | K | -1.2340 | |
| 3 | F | K | -0.1139 | |
| 4 | E | K | -1.5856 | |
| 5 | F | K | 0.4355 | |
| 6 | K | K | -1.4256 | |
| 7 | F | K | -0.0785 | |
| 8 | K | K | -1.5305 | |
| 1 | F | L | 1.0857 | |
| 2 | E | L | -1.1676 | |
| 3 | F | L | 0.0000 | |
| 4 | E | L | -2.3499 | |
| 5 | F | L | -1.0639 | |
| 6 | K | L | -2.5384 | |
| 7 | F | L | 0.0000 | |
| 8 | K | L | -2.4586 |