| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAYQHETADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGVPLPDAPPPSPLYTPPPASSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEQNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9482 | |
| 2 | L | A | 1.9741 | |
| 3 | P | A | 0.6605 | |
| 4 | P | A | 0.3536 | |
| 5 | T | A | 0.1038 | |
| 6 | T | A | 0.1219 | |
| 7 | P | A | 0.1360 | |
| 8 | V | A | 1.1959 | |
| 9 | A | A | 0.0201 | |
| 10 | K | A | -1.1498 | |
| 11 | V | A | -0.4234 | |
| 12 | Q | A | -1.5236 | |
| 13 | S | A | -1.6004 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4150 | |
| 16 | E | A | -2.4344 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4608 | |
| 20 | P | A | 0.1088 | |
| 21 | T | A | 0.1138 | |
| 22 | S | A | -0.1703 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1124 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1522 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7103 | |
| 31 | R | A | -2.5886 | |
| 32 | L | A | -0.7395 | |
| 33 | L | A | 1.2398 | |
| 34 | T | A | 1.4747 | |
| 35 | V | A | 2.0370 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2006 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6225 | |
| 40 | K | A | -1.6348 | |
| 41 | D | A | -0.9172 | |
| 42 | I | A | 0.8570 | |
| 43 | V | A | 1.0326 | |
| 44 | K | A | -1.1906 | |
| 45 | N | A | -1.9321 | |
| 46 | G | A | -1.2311 | |
| 47 | K | A | -0.9393 | |
| 48 | V | A | 1.5130 | |
| 49 | V | A | 2.0820 | |
| 50 | V | A | 1.3329 | |
| 51 | P | A | 0.5033 | |
| 52 | K | A | -0.6067 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1386 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4852 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2904 | |
| 70 | K | A | -1.8066 | |
| 71 | F | A | -0.6565 | |
| 72 | A | A | -0.5597 | |
| 73 | L | A | -0.8457 | |
| 74 | P | A | -1.2536 | |
| 75 | Q | A | -2.4720 | |
| 76 | K | A | -3.0908 | |
| 77 | D | A | -2.9897 | |
| 78 | F | A | -1.6467 | |
| 79 | Y | A | -1.9179 | |
| 80 | D | A | -2.7446 | |
| 81 | P | A | -2.3429 | |
| 82 | E | A | -3.0612 | |
| 83 | K | A | -3.4359 | |
| 84 | E | A | -2.4929 | |
| 85 | R | A | -1.2825 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6259 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9510 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3032 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6684 | |
| 99 | G | A | -0.5340 | |
| 100 | P | A | -0.4254 | |
| 101 | L | A | -0.0026 | |
| 102 | G | A | -0.3061 | |
| 103 | K | A | -0.8368 | |
| 104 | G | A | -0.6477 | |
| 105 | S | A | -0.6321 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1145 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4291 | |
| 110 | L | A | 0.4116 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0107 | |
| 113 | K | A | -0.3708 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4257 | |
| 117 | T | A | -1.2325 | |
| 118 | E | A | -2.6594 | |
| 119 | N | A | -2.3765 | |
| 120 | P | A | -1.5230 | |
| 121 | T | A | -0.7552 | |
| 122 | A | A | -0.2721 | |
| 123 | Y | A | 0.3363 | |
| 124 | Q | A | -0.7942 | |
| 125 | H | A | -1.0982 | |
| 126 | E | A | -1.8610 | |
| 127 | T | A | -1.3025 | |
| 128 | A | A | -1.1540 | |
| 129 | D | A | -1.9770 | |
| 130 | V | A | -1.2373 | |
| 131 | R | A | -0.7948 | |
| 132 | V | A | 0.3655 | |
| 133 | A | A | 0.4349 | |
| 134 | F | A | 0.2681 | |
| 135 | S | A | -0.1159 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8090 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5640 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2662 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1016 | |
| 157 | D | A | 0.3414 | |
| 158 | I | A | 0.8293 | |
| 159 | A | A | 0.0984 | |
| 160 | E | A | -1.4834 | |
| 161 | P | A | -0.2446 | |
| 162 | C | A | 0.1815 | |
| 163 | P | A | -0.1640 | |
| 164 | G | A | -0.0646 | |
| 165 | L | A | 0.6092 | |
| 166 | P | A | -0.0981 | |
| 167 | P | A | -0.3333 | |
| 168 | G | A | -0.4137 | |
| 169 | A | A | 0.2944 | |
| 170 | C | A | 1.0952 | |
| 171 | P | A | 0.5522 | |
| 172 | P | A | 0.7794 | |
| 173 | I | A | 2.0266 | |
| 174 | Q | A | 0.8258 | |
| 175 | L | A | 1.4140 | |
| 176 | V | A | 0.8024 | |
| 177 | N | A | -0.3504 | |
| 178 | S | A | -0.0137 | |
| 179 | V | A | 0.3763 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3749 | |
| 182 | D | A | 0.0780 | |
| 183 | G | A | -0.1494 | |
| 184 | D | A | -0.5688 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1669 | |
| 190 | F | A | 0.0640 | |
| 191 | G | A | -0.0958 | |
| 192 | N | A | -0.2926 | |
| 193 | M | A | -0.1661 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4010 | |
| 197 | E | A | -2.5872 | |
| 198 | L | A | -1.2044 | |
| 199 | Q | A | -2.5251 | |
| 200 | Q | A | -3.3407 | |
| 201 | D | A | -3.6005 | |
| 202 | R | A | -3.3342 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1914 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3869 | |
| 211 | S | A | -1.9237 | |
| 212 | T | A | -1.4962 | |
| 213 | R | A | -2.1915 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1789 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2954 | |
| 220 | L | A | 0.4722 | |
| 221 | K | A | -1.3616 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8946 | |
| 224 | N | A | -1.6636 | |
| 225 | E | A | -1.3196 | |
| 226 | A | A | -0.6750 | |
| 227 | Y | A | -0.4015 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7118 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.1019 | |
| 234 | F | A | 0.2933 | |
| 235 | G | A | -0.7660 | |
| 236 | R | A | -2.5087 | |
| 237 | R | A | -2.6811 | |
| 238 | E | A | -2.0014 | |
| 239 | Q | A | -0.0713 | |
| 240 | V | A | 1.5672 | |
| 241 | Y | A | 1.2418 | |
| 242 | A | A | 0.1517 | |
| 243 | R | A | -1.3637 | |
| 244 | H | A | -1.1979 | |
| 245 | F | A | -0.1889 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7057 | |
| 249 | A | A | -1.1492 | |
| 250 | G | A | -1.0048 | |
| 251 | P | A | -0.7814 | |
| 252 | D | A | -0.4700 | |
| 253 | G | A | 0.0684 | |
| 254 | V | A | 1.2988 | |
| 255 | P | A | -0.0289 | |
| 256 | L | A | 0.1980 | |
| 257 | P | A | -0.4499 | |
| 258 | D | A | -1.8852 | |
| 259 | A | A | -0.8944 | |
| 260 | P | A | -0.9451 | |
| 261 | P | A | -0.6258 | |
| 262 | P | A | -0.3229 | |
| 263 | S | A | -0.1885 | |
| 264 | P | A | 0.4033 | |
| 265 | L | A | 1.4979 | |
| 266 | Y | A | 0.6526 | |
| 267 | T | A | 0.0796 | |
| 268 | P | A | -0.2902 | |
| 269 | P | A | 0.1628 | |
| 270 | P | A | -0.1886 | |
| 271 | A | A | 0.1876 | |
| 272 | S | A | 0.0319 | |
| 273 | S | A | 0.3768 | |
| 274 | P | A | 0.5812 | |
| 275 | Y | A | 1.3816 | |
| 276 | A | A | 1.0341 | |
| 277 | V | A | 1.4001 | |
| 278 | R | A | -0.0303 | |
| 279 | P | A | -0.5150 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.2872 | |
| 282 | D | A | -0.6013 | |
| 283 | Y | A | 0.8558 | |
| 284 | F | A | 0.7077 | |
| 285 | G | A | 0.1285 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9071 | |
| 291 | L | A | 1.6021 | |
| 292 | V | A | 0.5891 | |
| 293 | S | A | -0.1677 | |
| 294 | S | A | -0.9693 | |
| 295 | D | A | -1.8449 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0603 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6054 | |
| 301 | R | A | -1.8336 | |
| 302 | P | A | -0.9323 | |
| 303 | F | A | -0.1140 | |
| 304 | W | A | -0.4997 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0726 | |
| 307 | R | A | -2.8215 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3450 | |
| 310 | G | A | -1.2074 | |
| 311 | N | A | -1.2995 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9710 | |
| 319 | N | A | -0.9014 | |
| 320 | E | A | -1.0599 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3848 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2345 | |
| 333 | N | A | 0.3578 | |
| 334 | F | A | 1.4342 | |
| 335 | T | A | 0.7303 | |
| 336 | I | A | 0.3887 | |
| 337 | S | A | -1.0061 | |
| 338 | Q | A | -1.7647 | |
| 339 | Q | A | -1.3466 | |
| 340 | L | A | 0.6347 | |
| 341 | C | A | 0.3046 | |
| 342 | T | A | -0.3382 | |
| 343 | P | A | -0.8471 | |
| 344 | E | A | -2.0440 | |
| 345 | Q | A | -1.9948 | |
| 346 | N | A | -1.2373 | |
| 347 | V | A | 0.6207 | |
| 348 | Y | A | 0.9550 | |
| 349 | D | A | -0.1402 | |
| 350 | P | A | -0.4246 | |
| 351 | S | A | -0.3502 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.9054 | |
| 354 | K | A | -1.8704 | |
| 355 | N | A | -1.8025 | |
| 356 | Y | A | -0.1219 | |
| 357 | L | A | 0.5717 | |
| 358 | R | A | 0.9410 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4789 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0045 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8925 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6603 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3104 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3294 | |
| 376 | L | A | -1.7634 | |
| 377 | D | A | -2.0508 | |
| 378 | P | A | -1.0707 | |
| 379 | G | A | -1.0218 | |
| 380 | V | A | -0.9339 | |
| 381 | L | A | -0.5491 | |
| 382 | A | A | -0.6630 | |
| 383 | H | A | -0.8465 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3985 | |
| 386 | T | A | -0.5754 | |
| 387 | M | A | -0.3334 | |
| 388 | N | A | -0.8638 | |
| 389 | P | A | -1.2982 | |
| 390 | T | A | -1.5936 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5943 | |
| 393 | E | A | -2.9893 | |
| 394 | N | A | -2.8351 | |
| 395 | W | A | -1.5615 | |
| 396 | N | A | -1.1377 | |
| 397 | L | A | -0.2164 | |
| 398 | G | A | 0.5489 | |
| 399 | F | A | 2.4432 | |
| 400 | V | A | 1.8777 | |
| 401 | P | A | 0.0754 | |
| 402 | P | A | -1.9039 | |
| 403 | K | A | -3.4785 | |
| 404 | E | A | -3.9466 | |
| 405 | R | A | -4.3387 | |
| 406 | E | A | -3.9495 | |
| 407 | D | A | -2.9363 | |
| 408 | P | A | -1.7998 | |
| 409 | Y | A | -0.9826 | |
| 410 | K | A | -2.0977 | |
| 411 | G | A | -0.6357 | |
| 412 | L | A | 0.6584 | |
| 413 | I | A | 1.5800 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3909 | |
| 416 | E | A | -1.6613 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8505 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8985 | |
| 421 | E | A | -2.5105 | |
| 422 | R | A | -2.0138 | |
| 423 | F | A | -1.0292 | |
| 424 | S | A | -1.3368 | |
| 425 | Q | A | -1.8198 | |
| 426 | D | A | -2.9032 | |
| 427 | L | A | -1.9878 | |
| 428 | D | A | -2.7496 | |
| 429 | Q | A | -2.5984 | |
| 430 | F | A | -1.4251 | |
| 431 | A | A | -0.9013 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6065 | |
| 435 | K | A | -0.7584 | |
| 436 | F | A | 0.1444 | |
| 437 | L | A | 1.0233 | |
| 438 | Y | A | 0.8134 | |
| 439 | Q | A | -0.2769 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine