| Chain sequence(s) |
A: MSHHHHHHSGMIKSMEEIKKEALPYLRRTLEIVKELAGEGYFEIEEKVDEDTGKKYLVPVINEEKMKPSDTKAWGLYDTALAASMAINAIENSDNEEEITHWLTSTLQQLFYVVIPLLIEKLALPQGGTVTYDWDHRVTVEMPSGERSRAMELAEWREELWKTRLSKFWELDMKWVKGEVSGEEVLDVAVPLFKELVDYIESNLNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:57)
[INFO] Main: Simulation completed successfully. (00:07:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5535 | |
| 2 | S | A | -0.6061 | |
| 3 | H | A | -1.7256 | |
| 4 | H | A | -2.3323 | |
| 5 | H | A | -2.7108 | |
| 6 | H | A | -2.7509 | |
| 7 | H | A | -2.5334 | |
| 8 | H | A | -2.0240 | |
| 9 | S | A | -0.8554 | |
| 10 | G | A | -0.2875 | |
| 11 | M | A | 1.0297 | |
| 12 | I | A | 0.8659 | |
| 13 | K | A | -0.9651 | |
| 14 | S | A | -1.3437 | |
| 15 | M | A | -2.0461 | |
| 16 | E | A | -3.2162 | |
| 17 | E | A | -3.1019 | |
| 18 | I | A | 0.0000 | |
| 19 | K | A | -2.4925 | |
| 20 | K | A | -3.0302 | |
| 21 | E | A | -1.8892 | |
| 22 | A | A | 0.0000 | |
| 23 | L | A | -1.1924 | |
| 24 | P | A | -1.1440 | |
| 25 | Y | A | -1.3906 | |
| 26 | L | A | 0.0000 | |
| 27 | R | A | -2.4045 | |
| 28 | R | A | -2.1873 | |
| 29 | T | A | 0.0000 | |
| 30 | L | A | 0.0000 | |
| 31 | E | A | -3.0122 | |
| 32 | I | A | 0.0000 | |
| 33 | V | A | 0.0000 | |
| 34 | K | A | -2.5115 | |
| 35 | E | A | -2.8474 | |
| 36 | L | A | 0.0000 | |
| 37 | A | A | -1.3877 | |
| 38 | G | A | -1.7290 | |
| 39 | E | A | -2.5636 | |
| 40 | G | A | -2.0994 | |
| 41 | Y | A | -1.7149 | |
| 42 | F | A | 0.0000 | |
| 43 | E | A | -1.7487 | |
| 44 | I | A | -1.2385 | |
| 45 | E | A | -1.9674 | |
| 46 | E | A | -2.8203 | |
| 47 | K | A | -2.6357 | |
| 48 | V | A | -2.1952 | |
| 49 | D | A | -2.8289 | |
| 50 | E | A | -3.4531 | |
| 51 | D | A | -3.0994 | |
| 52 | T | A | -2.4050 | |
| 53 | G | A | -2.5871 | |
| 54 | K | A | -3.1566 | |
| 55 | K | A | -3.2579 | |
| 56 | Y | A | -1.9434 | |
| 57 | L | A | 0.0000 | |
| 58 | V | A | -0.3706 | |
| 59 | P | A | 0.0000 | |
| 60 | V | A | -0.0364 | |
| 61 | I | A | -0.7151 | |
| 62 | N | A | -2.3500 | |
| 63 | E | A | -3.3383 | |
| 64 | E | A | -3.5618 | |
| 65 | K | A | -3.0248 | |
| 66 | M | A | 0.0000 | |
| 67 | K | A | -2.3923 | |
| 68 | P | A | -1.1656 | |
| 69 | S | A | -1.0170 | |
| 70 | D | A | -1.3226 | |
| 71 | T | A | -0.8784 | |
| 72 | K | A | -1.0525 | |
| 73 | A | A | 0.0000 | |
| 74 | W | A | -0.4441 | |
| 75 | G | A | -0.5154 | |
| 76 | L | A | 0.0000 | |
| 77 | Y | A | -0.3292 | |
| 78 | D | A | -1.0678 | |
| 79 | T | A | 0.0000 | |
| 80 | A | A | 0.0000 | |
| 81 | L | A | 0.2664 | |
| 82 | A | A | 0.0000 | |
| 83 | A | A | 0.0000 | |
| 84 | S | A | 0.0000 | |
| 85 | M | A | 0.0665 | |
| 86 | A | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | N | A | -1.0965 | |
| 89 | A | A | 0.0000 | |
| 90 | I | A | 0.0000 | |
| 91 | E | A | -2.7884 | |
| 92 | N | A | -2.3094 | |
| 93 | S | A | -2.3542 | |
| 94 | D | A | -3.1466 | |
| 95 | N | A | -3.0488 | |
| 96 | E | A | -2.9256 | |
| 97 | E | A | -3.0668 | |
| 98 | E | A | -2.5743 | |
| 99 | I | A | 0.0000 | |
| 100 | T | A | 0.0000 | |
| 101 | H | A | -1.0885 | |
| 102 | W | A | -0.4494 | |
| 103 | L | A | 0.0000 | |
| 104 | T | A | 0.0000 | |
| 105 | S | A | -0.3782 | |
| 106 | T | A | 0.0000 | |
| 107 | L | A | 0.0000 | |
| 108 | Q | A | -0.3286 | |
| 109 | Q | A | -0.4768 | |
| 110 | L | A | 0.0000 | |
| 111 | F | A | 0.0000 | |
| 112 | Y | A | -0.0625 | |
| 113 | V | A | 0.0094 | |
| 114 | V | A | 0.0000 | |
| 115 | I | A | 0.0000 | |
| 116 | P | A | 0.0000 | |
| 117 | L | A | -0.3456 | |
| 118 | L | A | 0.0000 | |
| 119 | I | A | 0.0000 | |
| 120 | E | A | -0.7527 | |
| 121 | K | A | -1.2295 | |
| 122 | L | A | -0.8134 | |
| 123 | A | A | 0.0000 | |
| 124 | L | A | -0.1956 | |
| 125 | P | A | -0.7674 | |
| 126 | Q | A | -1.4259 | |
| 127 | G | A | -1.0318 | |
| 128 | G | A | 0.0000 | |
| 129 | T | A | -0.7601 | |
| 130 | V | A | -0.1163 | |
| 131 | T | A | -0.4276 | |
| 132 | Y | A | -0.3103 | |
| 133 | D | A | -0.8287 | |
| 134 | W | A | -0.1587 | |
| 135 | D | A | -1.7320 | |
| 136 | H | A | -1.2189 | |
| 137 | R | A | -1.7306 | |
| 138 | V | A | -0.8750 | |
| 139 | T | A | -0.9544 | |
| 140 | V | A | 0.0000 | |
| 141 | E | A | -2.3308 | |
| 142 | M | A | 0.0000 | |
| 143 | P | A | -1.5404 | |
| 144 | S | A | -1.8954 | |
| 145 | G | A | -2.2944 | |
| 146 | E | A | -3.3621 | |
| 147 | R | A | -3.5467 | |
| 148 | S | A | 0.0000 | |
| 149 | R | A | -2.2776 | |
| 150 | A | A | 0.0000 | |
| 151 | M | A | -2.2077 | |
| 152 | E | A | -2.6176 | |
| 153 | L | A | 0.0000 | |
| 154 | A | A | 0.0000 | |
| 155 | E | A | -2.9945 | |
| 156 | W | A | -1.6692 | |
| 157 | R | A | 0.0000 | |
| 158 | E | A | -2.8384 | |
| 159 | E | A | -3.3513 | |
| 160 | L | A | 0.0000 | |
| 161 | W | A | -2.5010 | |
| 162 | K | A | -3.1528 | |
| 163 | T | A | -2.6332 | |
| 164 | R | A | -3.0644 | |
| 165 | L | A | 0.0000 | |
| 166 | S | A | -2.3401 | |
| 167 | K | A | -3.0635 | |
| 168 | F | A | 0.0000 | |
| 169 | W | A | -1.3708 | |
| 170 | E | A | -2.1818 | |
| 171 | L | A | -1.2918 | |
| 172 | D | A | 0.0000 | |
| 173 | M | A | -0.0551 | |
| 174 | K | A | -1.4697 | |
| 175 | W | A | -0.9925 | |
| 176 | V | A | 0.3889 | |
| 177 | K | A | -1.6007 | |
| 178 | G | A | -1.5972 | |
| 179 | E | A | -2.2588 | |
| 180 | V | A | -1.1632 | |
| 181 | S | A | -1.0965 | |
| 182 | G | A | 0.0000 | |
| 183 | E | A | -1.3852 | |
| 184 | E | A | -0.8726 | |
| 185 | V | A | 0.0000 | |
| 186 | L | A | 0.0000 | |
| 187 | D | A | -0.7347 | |
| 188 | V | A | -0.7082 | |
| 189 | A | A | 0.0000 | |
| 190 | V | A | 0.0000 | |
| 191 | P | A | -0.8599 | |
| 192 | L | A | 0.0000 | |
| 193 | F | A | 0.0000 | |
| 194 | K | A | -1.2109 | |
| 195 | E | A | -1.5642 | |
| 196 | L | A | 0.0000 | |
| 197 | V | A | 0.0000 | |
| 198 | D | A | -1.6279 | |
| 199 | Y | A | -0.7144 | |
| 200 | I | A | 0.0000 | |
| 201 | E | A | -1.4031 | |
| 202 | S | A | -0.9502 | |
| 203 | N | A | 0.0000 | |
| 204 | L | A | -1.0260 | |
| 205 | N | A | -1.4294 | |
| 206 | S | A | -0.9812 |