| Chain sequence(s) |
A: GHKGHKGHKYSDEPRGHKGHKGHKYSDEPRGHKGHKGHKYSDEPRGHKGHKGHKYSDEPRGHKGHKGHK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:39)
[INFO] Main: Simulation completed successfully. (00:01:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.4073 | |
| 2 | H | A | -2.2589 | |
| 3 | K | A | -2.9617 | |
| 4 | G | A | -2.6685 | |
| 5 | H | A | -2.7628 | |
| 6 | K | A | -3.1304 | |
| 7 | G | A | -2.3996 | |
| 8 | H | A | -2.2044 | |
| 9 | K | A | -2.1200 | |
| 10 | Y | A | -0.6689 | |
| 11 | S | A | -1.4868 | |
| 12 | D | A | -2.8937 | |
| 13 | E | A | -3.2181 | |
| 14 | P | A | -2.8144 | |
| 15 | R | A | -3.2608 | |
| 16 | G | A | -2.6447 | |
| 17 | H | A | -2.6451 | |
| 18 | K | A | -2.9335 | |
| 19 | G | A | -2.4376 | |
| 20 | H | A | -2.7111 | |
| 21 | K | A | -2.9925 | |
| 22 | G | A | -2.2700 | |
| 23 | H | A | -2.3336 | |
| 24 | K | A | -2.1138 | |
| 25 | Y | A | -0.7107 | |
| 26 | S | A | -1.4239 | |
| 27 | D | A | -2.7202 | |
| 28 | E | A | -3.1825 | |
| 29 | P | A | -2.6199 | |
| 30 | R | A | -2.9856 | |
| 31 | G | A | -2.5843 | |
| 32 | H | A | -2.7464 | |
| 33 | K | A | -2.9639 | |
| 34 | G | A | -2.5163 | |
| 35 | H | A | -2.6073 | |
| 36 | K | A | -2.9150 | |
| 37 | G | A | -2.3931 | |
| 38 | H | A | -1.9114 | |
| 39 | K | A | -2.0662 | |
| 40 | Y | A | -0.5871 | |
| 41 | S | A | -1.9025 | |
| 42 | D | A | -3.2420 | |
| 43 | E | A | -3.5109 | |
| 44 | P | A | -3.1158 | |
| 45 | R | A | -3.4386 | |
| 46 | G | A | -2.5861 | |
| 47 | H | A | -3.0148 | |
| 48 | K | A | -3.3051 | |
| 49 | G | A | -2.7986 | |
| 50 | H | A | -2.8135 | |
| 51 | K | A | -3.4282 | |
| 52 | G | A | -2.3801 | |
| 53 | H | A | -2.1965 | |
| 54 | K | A | -1.9097 | |
| 55 | Y | A | -0.4690 | |
| 56 | S | A | -1.3579 | |
| 57 | D | A | -2.9556 | |
| 58 | E | A | -3.1554 | |
| 59 | P | A | -2.7030 | |
| 60 | R | A | -3.2376 | |
| 61 | G | A | -2.4765 | |
| 62 | H | A | -2.7659 | |
| 63 | K | A | -3.1437 | |
| 64 | G | A | -2.5877 | |
| 65 | H | A | -2.7592 | |
| 66 | K | A | -2.9075 | |
| 67 | G | A | -2.4374 | |
| 68 | H | A | -2.5841 | |
| 69 | K | A | -2.3382 |