Project name: H677R

Status: done

Started: 2025-07-23 09:46:10
Settings
Chain sequence(s) A: DAEFRRDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVI
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:36)
Show buried residues

Minimal score value
-2.5134
Maximal score value
2.4703
Average score
-0.0804
Total score value
-3.2949

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.7785
2 A A -0.6082
3 E A -1.4497
4 F A 1.2621
5 R A -1.8255
6 R A -2.5134
7 D A -1.9279
8 S A -0.5760
9 G A -0.0021
10 Y A 0.7117
11 E A -1.4903
12 V A 0.1542
13 H A -1.0376
14 H A -1.1504
15 Q A -1.6659
16 K A -1.3585
17 L A 1.3423
18 V A 0.9272
19 F A 2.2810
20 F A 2.3085
21 A A -0.1010
22 E A -2.1404
23 D A -1.8024
24 V A 1.3603
25 G A -0.1651
26 S A -0.4486
27 N A -1.6025
28 K A -2.0224
29 G A -0.4523
30 A A 0.3150
31 I A 2.2727
32 I A 0.8010
33 G A -0.3041
34 L A 1.1475
35 M A 1.3810
36 V A 0.8235
37 G A -0.2829
38 G A -0.2238
39 V A 1.9420
40 V A 2.4703
41 I A 2.1343
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Laboratory of Theory of Biopolymers 2018