Chain sequence(s) |
A: DAEFRRDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVI
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35) [INFO] Main: Simulation completed successfully. (00:00:36) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | D | A | -1.7785 | |
2 | A | A | -0.6082 | |
3 | E | A | -1.4497 | |
4 | F | A | 1.2621 | |
5 | R | A | -1.8255 | |
6 | R | A | -2.5134 | |
7 | D | A | -1.9279 | |
8 | S | A | -0.5760 | |
9 | G | A | -0.0021 | |
10 | Y | A | 0.7117 | |
11 | E | A | -1.4903 | |
12 | V | A | 0.1542 | |
13 | H | A | -1.0376 | |
14 | H | A | -1.1504 | |
15 | Q | A | -1.6659 | |
16 | K | A | -1.3585 | |
17 | L | A | 1.3423 | |
18 | V | A | 0.9272 | |
19 | F | A | 2.2810 | |
20 | F | A | 2.3085 | |
21 | A | A | -0.1010 | |
22 | E | A | -2.1404 | |
23 | D | A | -1.8024 | |
24 | V | A | 1.3603 | |
25 | G | A | -0.1651 | |
26 | S | A | -0.4486 | |
27 | N | A | -1.6025 | |
28 | K | A | -2.0224 | |
29 | G | A | -0.4523 | |
30 | A | A | 0.3150 | |
31 | I | A | 2.2727 | |
32 | I | A | 0.8010 | |
33 | G | A | -0.3041 | |
34 | L | A | 1.1475 | |
35 | M | A | 1.3810 | |
36 | V | A | 0.8235 | |
37 | G | A | -0.2829 | |
38 | G | A | -0.2238 | |
39 | V | A | 1.9420 | |
40 | V | A | 2.4703 | |
41 | I | A | 2.1343 |