| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDFYYITYGETGSSYWSYQEFTVPGSKSTATISGLKPGVDYTITVYAIDQWQYYYYEMGSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6718 | |
| 2 | S | A | 0.3618 | |
| 3 | D | A | -0.1430 | |
| 4 | V | A | -0.2982 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.6972 | |
| 7 | D | A | -3.0567 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9949 | |
| 10 | V | A | 0.1123 | |
| 11 | V | A | 1.5585 | |
| 12 | A | A | 0.9084 | |
| 13 | A | A | 0.3199 | |
| 14 | T | A | -0.3340 | |
| 15 | P | A | -1.1138 | |
| 16 | T | A | -0.9960 | |
| 17 | S | A | -0.5212 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7837 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9374 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.3003 | |
| 24 | A | A | -1.1666 | |
| 25 | P | A | 0.0000 | |
| 26 | A | A | 0.3414 | |
| 27 | V | A | 0.5156 | |
| 28 | T | A | -0.2999 | |
| 29 | V | A | -0.6559 | |
| 30 | D | A | -1.3027 | |
| 31 | F | A | -0.6826 | |
| 32 | Y | A | 0.0000 | |
| 33 | Y | A | 0.0008 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.7400 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4997 | |
| 39 | T | A | -1.0380 | |
| 40 | G | A | -0.6781 | |
| 41 | S | A | -0.1458 | |
| 42 | S | A | 0.5693 | |
| 43 | Y | A | 1.4708 | |
| 44 | W | A | 1.5201 | |
| 45 | S | A | 0.2736 | |
| 46 | Y | A | -0.2890 | |
| 47 | Q | A | -1.5839 | |
| 48 | E | A | -2.0391 | |
| 49 | F | A | -0.5548 | |
| 50 | T | A | -0.0547 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -0.9584 | |
| 53 | G | A | -1.1428 | |
| 54 | S | A | -1.2573 | |
| 55 | K | A | -1.9798 | |
| 56 | S | A | -1.1617 | |
| 57 | T | A | -0.6205 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.0713 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6542 | |
| 62 | G | A | -1.0289 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3840 | |
| 65 | P | A | -1.6610 | |
| 66 | G | A | -1.4544 | |
| 67 | V | A | -1.4563 | |
| 68 | D | A | -2.1069 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.9854 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.2871 | |
| 75 | A | A | 0.0000 | |
| 76 | I | A | 0.0000 | |
| 77 | D | A | -0.3226 | |
| 78 | Q | A | 0.3687 | |
| 79 | W | A | 1.6648 | |
| 80 | Q | A | 1.2669 | |
| 81 | Y | A | 2.2299 | |
| 82 | Y | A | 2.7703 | |
| 83 | Y | A | 2.5644 | |
| 84 | Y | A | 2.0425 | |
| 85 | E | A | 0.0840 | |
| 86 | M | A | 0.2222 | |
| 87 | G | A | 0.0000 | |
| 88 | S | A | -0.3549 | |
| 89 | P | A | -0.1060 | |
| 90 | I | A | -0.1829 | |
| 91 | S | A | -0.6671 | |
| 92 | I | A | -0.7271 | |
| 93 | N | A | -1.7674 | |
| 94 | Y | A | -1.5331 | |
| 95 | R | A | -2.5667 | |
| 96 | T | A | -1.6447 |