| Chain sequence(s) |
B: GSVYPKKTHWTAEITPNLHGTEVVVAGWVASLGDYGRVKIVKVSDREGGAAVSVYYLEYGKTPDHLFKVFAELSREDVVVIKGIVEASKAAGVEIFPSEIWILNKA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| -1 | G | B | -0.1559 | |
| 0 | S | B | 0.6546 | |
| 1 | V | B | 1.8859 | |
| 2 | Y | B | 1.5298 | |
| 3 | P | B | -0.1274 | |
| 4 | K | B | -1.5126 | |
| 5 | K | B | -1.0784 | |
| 6 | T | B | -1.0864 | |
| 7 | H | B | -0.8029 | |
| 8 | W | B | -0.2848 | |
| 9 | T | B | 0.0000 | |
| 10 | A | B | -0.7676 | |
| 11 | E | B | -1.3843 | |
| 12 | I | B | 0.0000 | |
| 13 | T | B | -1.1175 | |
| 14 | P | B | -1.3689 | |
| 15 | N | B | -1.7419 | |
| 16 | L | B | -1.3617 | |
| 17 | H | B | -1.8021 | |
| 18 | G | B | -1.3430 | |
| 19 | T | B | -1.3290 | |
| 20 | E | B | -1.8876 | |
| 21 | V | B | 0.0000 | |
| 22 | V | B | 0.0000 | |
| 23 | V | B | 0.0000 | |
| 24 | A | B | -0.0790 | |
| 25 | G | B | -0.1984 | |
| 26 | W | B | -0.9248 | |
| 27 | V | B | 0.0000 | |
| 28 | A | B | -0.9646 | |
| 29 | S | B | -0.6986 | |
| 30 | L | B | -0.2185 | |
| 31 | G | B | -0.3005 | |
| 32 | D | B | -1.2977 | |
| 33 | Y | B | -0.0710 | |
| 34 | G | B | -0.8956 | |
| 35 | R | B | -1.6079 | |
| 36 | V | B | -0.5983 | |
| 37 | K | B | -0.4891 | |
| 38 | I | B | 0.0326 | |
| 39 | V | B | 0.0000 | |
| 40 | K | B | -0.6774 | |
| 41 | V | B | 0.0000 | |
| 42 | S | B | 0.0000 | |
| 43 | D | B | -1.1217 | |
| 44 | R | B | -2.4635 | |
| 45 | E | B | -2.8658 | |
| 46 | G | B | -1.9105 | |
| 47 | G | B | -1.7189 | |
| 48 | A | B | -1.0123 | |
| 49 | A | B | -0.7833 | |
| 50 | V | B | 0.0000 | |
| 51 | S | B | -0.2763 | |
| 52 | V | B | 0.0000 | |
| 53 | Y | B | 0.0000 | |
| 54 | L | B | 0.0000 | |
| 55 | E | B | -1.0853 | |
| 56 | Y | B | -0.6830 | |
| 57 | G | B | -1.3948 | |
| 58 | K | B | -1.9503 | |
| 59 | T | B | 0.0000 | |
| 60 | P | B | -1.8959 | |
| 61 | D | B | -2.7002 | |
| 62 | H | B | -2.2833 | |
| 63 | L | B | 0.0000 | |
| 64 | F | B | -1.5744 | |
| 65 | K | B | -2.5510 | |
| 66 | V | B | -1.3895 | |
| 67 | F | B | 0.0000 | |
| 68 | A | B | -1.4507 | |
| 69 | E | B | -2.2036 | |
| 70 | L | B | 0.0000 | |
| 71 | S | B | -1.9264 | |
| 72 | R | B | -2.7535 | |
| 73 | E | B | -2.8347 | |
| 74 | D | B | 0.0000 | |
| 75 | V | B | -0.4198 | |
| 76 | V | B | 0.0000 | |
| 77 | V | B | 0.0000 | |
| 78 | I | B | 0.0000 | |
| 79 | K | B | -0.9961 | |
| 80 | G | B | 0.0000 | |
| 81 | I | B | -0.5421 | |
| 82 | V | B | 0.0000 | |
| 83 | E | B | -1.3099 | |
| 84 | A | B | -1.3115 | |
| 85 | S | B | -1.2748 | |
| 86 | K | B | -1.7615 | |
| 87 | A | B | -0.8139 | |
| 88 | A | B | -0.5799 | |
| 93 | G | B | -0.7879 | |
| 94 | V | B | -0.8185 | |
| 95 | E | B | -0.6115 | |
| 96 | I | B | 0.0000 | |
| 97 | F | B | -0.3335 | |
| 98 | P | B | 0.0000 | |
| 99 | S | B | -0.6886 | |
| 100 | E | B | -0.5277 | |
| 101 | I | B | 0.0000 | |
| 102 | W | B | 0.9703 | |
| 103 | I | B | 0.3765 | |
| 104 | L | B | 0.4371 | |
| 105 | N | B | -1.5182 | |
| 106 | K | B | -2.6798 | |
| 107 | A | B | -1.7526 |