| Chain sequence(s) |
A: IVKGH
C: IVKGH B: IVKGH E: IVKGH D: IVKGH G: IVKGH F: IVKGH I: IVKGH H: IVKGH K: IVKGH J: IVKGH L: IVKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:09)
[INFO] Main: Simulation completed successfully. (00:04:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 3.0328 | |
| 2 | V | A | 0.5747 | |
| 3 | K | A | -2.0378 | |
| 4 | G | A | -2.5761 | |
| 5 | H | A | -2.4432 | |
| 1 | I | B | 3.7908 | |
| 2 | V | B | 1.8740 | |
| 3 | K | B | -1.3587 | |
| 4 | G | B | -2.0544 | |
| 5 | H | B | -2.7552 | |
| 1 | I | C | 4.1514 | |
| 2 | V | C | 2.2512 | |
| 3 | K | C | -0.6052 | |
| 4 | G | C | -1.0753 | |
| 5 | H | C | -1.8944 | |
| 1 | I | D | 3.5823 | |
| 2 | V | D | 1.5888 | |
| 3 | K | D | -0.9375 | |
| 4 | G | D | -1.2722 | |
| 5 | H | D | -2.0471 | |
| 1 | I | E | 3.0348 | |
| 2 | V | E | 1.7570 | |
| 3 | K | E | -1.1224 | |
| 4 | G | E | -1.0627 | |
| 5 | H | E | -1.4077 | |
| 1 | I | F | 3.3800 | |
| 2 | V | F | 1.1831 | |
| 3 | K | F | -1.1282 | |
| 4 | G | F | -1.2845 | |
| 5 | H | F | -1.8436 | |
| 1 | I | G | 3.7950 | |
| 2 | V | G | 1.4851 | |
| 3 | K | G | -1.1732 | |
| 4 | G | G | -1.5320 | |
| 5 | H | G | -1.6653 | |
| 1 | I | H | 3.6781 | |
| 2 | V | H | 1.8022 | |
| 3 | K | H | -1.0764 | |
| 4 | G | H | -1.6174 | |
| 5 | H | H | -2.3438 | |
| 1 | I | I | 3.4302 | |
| 2 | V | I | 1.5629 | |
| 3 | K | I | -1.4906 | |
| 4 | G | I | -1.8386 | |
| 5 | H | I | -2.3306 | |
| 1 | I | J | 3.3651 | |
| 2 | V | J | 1.5698 | |
| 3 | K | J | -1.0808 | |
| 4 | G | J | -1.4902 | |
| 5 | H | J | -1.6376 | |
| 1 | I | K | 3.3285 | |
| 2 | V | K | 1.6052 | |
| 3 | K | K | -1.1122 | |
| 4 | G | K | -1.2495 | |
| 5 | H | K | -1.7061 | |
| 1 | I | L | 2.7581 | |
| 2 | V | L | 1.1236 | |
| 3 | K | L | -1.5834 | |
| 4 | G | L | -1.7360 | |
| 5 | H | L | -1.8186 |