| Chain sequence(s) |
B: MAFKDELMARLKALKAVLAKLEEQLSPEQAKKAKAAFEKIEAKVKELMAT
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:53)
[INFO] Main: Simulation completed successfully. (00:01:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 0.8659 | |
| 2 | A | B | 0.3770 | |
| 3 | F | B | 1.0467 | |
| 4 | K | B | -0.7098 | |
| 5 | D | B | -1.8910 | |
| 6 | E | B | -1.9145 | |
| 7 | L | B | -1.3641 | |
| 8 | M | B | -1.6475 | |
| 9 | A | B | -2.0494 | |
| 10 | R | B | -2.8141 | |
| 11 | L | B | 0.0000 | |
| 12 | K | B | -2.3749 | |
| 13 | A | B | -1.1085 | |
| 14 | L | B | -0.6338 | |
| 15 | K | B | -2.0143 | |
| 16 | A | B | -0.8799 | |
| 17 | V | B | 0.1010 | |
| 18 | L | B | 0.0000 | |
| 19 | A | B | -1.4792 | |
| 20 | K | B | -2.1543 | |
| 21 | L | B | -1.5886 | |
| 22 | E | B | -3.2673 | |
| 23 | E | B | -3.0828 | |
| 24 | Q | B | -2.5485 | |
| 25 | L | B | -1.9957 | |
| 26 | S | B | -2.0152 | |
| 27 | P | B | -2.6566 | |
| 28 | E | B | -3.4742 | |
| 29 | Q | B | -3.2210 | |
| 30 | A | B | 0.0000 | |
| 31 | K | B | -3.8588 | |
| 32 | K | B | -3.8181 | |
| 33 | A | B | -2.4711 | |
| 34 | K | B | -3.0179 | |
| 35 | A | B | -2.3625 | |
| 36 | A | B | -1.7909 | |
| 37 | F | B | 0.0000 | |
| 38 | E | B | -3.1544 | |
| 39 | K | B | -2.7837 | |
| 40 | I | B | -1.4938 | |
| 41 | E | B | -2.3283 | |
| 42 | A | B | -2.4014 | |
| 43 | K | B | -2.6073 | |
| 44 | V | B | -1.6726 | |
| 45 | K | B | -2.4660 | |
| 46 | E | B | -2.3682 | |
| 47 | L | B | -0.6418 | |
| 48 | M | B | -0.6787 | |
| 49 | A | B | -0.8322 | |
| 50 | T | B | -0.2795 |