| Chain sequence(s) |
A: LPAPKNLVVSEVTEDSLRLSWDDPRGFYESFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAEFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.7183 | |
| 2 | P | A | 0.1345 | |
| 3 | A | A | -0.0870 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.9858 | |
| 6 | N | A | -1.3915 | |
| 7 | L | A | -0.1408 | |
| 8 | V | A | 0.9655 | |
| 9 | V | A | 0.1019 | |
| 10 | S | A | -0.6793 | |
| 11 | E | A | -1.8554 | |
| 12 | V | A | -0.9224 | |
| 13 | T | A | -1.5319 | |
| 14 | E | A | -2.7755 | |
| 15 | D | A | -2.7051 | |
| 16 | S | A | -2.1370 | |
| 17 | L | A | 0.0000 | |
| 18 | R | A | -1.6341 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.6658 | |
| 21 | W | A | 0.0000 | |
| 22 | D | A | -2.2051 | |
| 23 | D | A | 0.0000 | |
| 24 | P | A | -1.5192 | |
| 25 | R | A | -1.7738 | |
| 26 | G | A | -0.9870 | |
| 27 | F | A | 0.3614 | |
| 28 | Y | A | 0.0000 | |
| 29 | E | A | -1.4977 | |
| 30 | S | A | -1.2003 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | -0.3385 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | -0.5495 | |
| 35 | Y | A | -0.6078 | |
| 36 | Q | A | -1.4627 | |
| 37 | E | A | -2.0763 | |
| 38 | S | A | -2.0585 | |
| 39 | E | A | -2.5016 | |
| 40 | K | A | -1.7965 | |
| 41 | V | A | 0.0816 | |
| 42 | G | A | -0.9022 | |
| 43 | E | A | -2.0400 | |
| 44 | A | A | -0.9322 | |
| 45 | I | A | -0.3965 | |
| 46 | N | A | -0.9873 | |
| 47 | L | A | -0.1036 | |
| 48 | T | A | -0.2044 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -0.9849 | |
| 51 | G | A | -0.9889 | |
| 52 | S | A | -1.2455 | |
| 53 | E | A | -1.6601 | |
| 54 | R | A | -1.3803 | |
| 55 | S | A | -1.0270 | |
| 56 | Y | A | -1.0889 | |
| 57 | D | A | -2.1386 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.4927 | |
| 60 | G | A | -1.4820 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.9572 | |
| 63 | P | A | -2.5026 | |
| 64 | G | A | -1.8560 | |
| 65 | T | A | -2.2025 | |
| 66 | E | A | -2.7593 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | -1.4589 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | 0.0000 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -0.9321 | |
| 75 | H | A | -1.1493 | |
| 76 | N | A | -2.3471 | |
| 77 | V | A | -1.0598 | |
| 78 | Y | A | -0.3413 | |
| 79 | K | A | -2.2915 | |
| 80 | D | A | -2.8027 | |
| 81 | T | A | -2.0485 | |
| 82 | N | A | -2.6224 | |
| 83 | M | A | -1.5236 | |
| 84 | R | A | -1.5862 | |
| 85 | G | A | 0.0202 | |
| 86 | L | A | 1.2285 | |
| 87 | P | A | 0.3699 | |
| 88 | L | A | 0.1252 | |
| 89 | S | A | -0.2151 | |
| 90 | A | A | -0.5505 | |
| 91 | E | A | -2.1576 | |
| 92 | F | A | 0.0000 | |
| 93 | T | A | -1.6381 | |
| 94 | T | A | -1.8939 |