| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASGFNFSYYSIHWVRQAPGKGLEWVASIYSYSGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSDTQGMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSSTGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | MI104C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 2.04506 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:00:54)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:59)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:51)
[INFO] Main: Simulation completed successfully. (00:01:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.1913 | |
| 2 | V | C | -1.4124 | |
| 3 | Q | C | -1.3459 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.7977 | |
| 6 | E | C | 0.0000 | |
| 7 | S | C | -0.3803 | |
| 8 | G | C | -0.9369 | |
| 9 | G | C | -0.3562 | |
| 10 | G | C | -0.2065 | |
| 11 | L | C | 0.0064 | |
| 12 | V | C | 0.0000 | |
| 13 | Q | C | -1.7633 | |
| 14 | P | C | -1.9632 | |
| 15 | G | C | -1.5838 | |
| 16 | G | C | -1.2252 | |
| 17 | S | C | -1.3909 | |
| 18 | L | C | -1.2491 | |
| 19 | R | C | -2.2900 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.5370 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.2236 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -1.2871 | |
| 26 | G | C | -1.6184 | |
| 27 | F | C | -1.0357 | |
| 28 | N | C | -1.0919 | |
| 29 | F | C | 0.0000 | |
| 30 | S | C | 0.7131 | |
| 31 | Y | C | 1.4690 | |
| 32 | Y | C | 0.6957 | |
| 33 | S | C | 0.6255 | |
| 34 | I | C | 0.0000 | |
| 35 | H | C | 0.4548 | |
| 36 | W | C | 0.0000 | |
| 37 | V | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -0.4882 | |
| 40 | A | C | -1.1266 | |
| 41 | P | C | -1.0705 | |
| 42 | G | C | -1.4197 | |
| 43 | K | C | -2.0913 | |
| 44 | G | C | -0.9570 | |
| 45 | L | C | 0.6147 | |
| 46 | E | C | -0.1035 | |
| 47 | W | C | 0.6431 | |
| 48 | V | C | 0.0000 | |
| 49 | A | C | 0.0000 | |
| 50 | S | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | Y | C | 1.3902 | |
| 53 | S | C | 1.0062 | |
| 54 | Y | C | 1.7984 | |
| 55 | S | C | 0.8565 | |
| 56 | G | C | 0.5532 | |
| 57 | Y | C | 1.6356 | |
| 58 | T | C | 1.2425 | |
| 59 | Y | C | 1.3610 | |
| 60 | Y | C | -0.0115 | |
| 61 | A | C | -0.9509 | |
| 62 | D | C | -2.3413 | |
| 63 | S | C | -1.7327 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.4669 | |
| 66 | G | C | -1.7889 | |
| 67 | R | C | -1.6680 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.8776 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.3079 | |
| 72 | A | C | -0.6495 | |
| 73 | D | C | -1.5452 | |
| 74 | T | C | -1.2232 | |
| 75 | S | C | -1.5255 | |
| 76 | K | C | -2.3427 | |
| 77 | N | C | -1.7084 | |
| 78 | T | C | 0.0000 | |
| 79 | A | C | 0.0000 | |
| 80 | Y | C | 0.0000 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.6914 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.5008 | |
| 85 | S | C | -1.3704 | |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -2.9330 | |
| 88 | A | C | -2.0185 | |
| 89 | E | C | -2.4495 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.8599 | |
| 92 | A | C | 0.0000 | |
| 93 | V | C | 0.3478 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | 0.4331 | |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | R | C | 0.0000 | |
| 99 | S | C | -0.8410 | |
| 100 | D | C | -1.3515 | |
| 101 | T | C | -1.4336 | |
| 102 | Q | C | -2.0096 | |
| 103 | G | C | -1.5044 | |
| 104 | I | C | -0.7463 | mutated: MI104C |
| 105 | D | C | -1.7366 | |
| 106 | Y | C | -0.4526 | |
| 107 | W | C | 0.1062 | |
| 108 | G | C | -0.0789 | |
| 109 | Q | C | -0.8487 | |
| 110 | G | C | -0.1228 | |
| 111 | T | C | 0.1278 | |
| 112 | L | C | 0.3306 | |
| 113 | V | C | 0.0000 | |
| 114 | T | C | -0.5117 | |
| 115 | V | C | 0.0000 | |
| 116 | S | C | -0.8829 | |
| 117 | S | C | -0.7254 | |
| 118 | A | C | -0.4849 | |
| 119 | S | C | -0.6404 | |
| 120 | T | C | -0.7840 | |
| 121 | K | C | -1.4213 | |
| 122 | G | C | -1.6551 | |
| 123 | P | C | 0.0000 | |
| 124 | S | C | -0.1606 | |
| 125 | V | C | 0.0000 | |
| 126 | F | C | 1.0048 | |
| 127 | P | C | -0.0582 | |
| 128 | L | C | 0.3151 | |
| 129 | A | C | -0.6607 | |
| 130 | P | C | -1.1023 | |
| 131 | S | C | -1.2354 | |
| 132 | S | C | -1.5544 | |
| 133 | K | C | -2.0204 | |
| 134 | S | C | -1.2604 | |
| 135 | S | C | -1.2002 | |
| 136 | T | C | -0.8937 | |
| 137 | G | C | -0.8621 | |
| 138 | G | C | -0.9119 | |
| 139 | T | C | -0.6268 | |
| 140 | A | C | -0.3906 | |
| 141 | A | C | 0.1166 | |
| 142 | L | C | 0.0000 | |
| 143 | G | C | 0.0000 | |
| 144 | C | C | 0.0000 | |
| 145 | L | C | 0.7565 | |
| 146 | V | C | 0.0000 | |
| 147 | K | C | -0.2392 | |
| 148 | D | C | -0.8207 | |
| 149 | Y | C | 0.0000 | |
| 150 | F | C | 0.0000 | |
| 151 | P | C | 0.0000 | |
| 152 | E | C | -0.5401 | |
| 153 | P | C | -0.7786 | |
| 154 | V | C | -0.8540 | |
| 155 | T | C | -0.7579 | |
| 156 | V | C | -0.4558 | |
| 157 | S | C | -0.3624 | |
| 158 | W | C | 0.0000 | |
| 159 | N | C | -0.6622 | |
| 160 | S | C | -0.5695 | |
| 161 | G | C | -0.4509 | |
| 162 | A | C | -0.2067 | |
| 163 | L | C | 0.0283 | |
| 164 | T | C | -0.2745 | |
| 165 | S | C | -0.3627 | |
| 166 | G | C | -0.4651 | |
| 167 | V | C | 0.0373 | |
| 168 | H | C | -0.4027 | |
| 169 | T | C | 0.2179 | |
| 170 | F | C | 0.9958 | |
| 171 | P | C | 0.7446 | |
| 172 | A | C | 1.2398 | |
| 173 | V | C | 2.4742 | |
| 174 | L | C | 2.0059 | |
| 175 | Q | C | 0.6053 | |
| 176 | S | C | 0.0311 | |
| 177 | S | C | -0.3034 | |
| 178 | G | C | 0.0822 | |
| 179 | L | C | 0.0980 | |
| 180 | Y | C | 0.6932 | |
| 181 | S | C | 0.0000 | |
| 182 | L | C | 0.0000 | |
| 183 | S | C | 0.6912 | |
| 184 | S | C | 0.0000 | |
| 185 | V | C | 0.4632 | |
| 186 | V | C | 0.0000 | |
| 187 | T | C | -0.2557 | |
| 188 | V | C | 0.0000 | |
| 189 | P | C | -0.6282 | |
| 190 | S | C | -0.5969 | |
| 191 | S | C | -0.6351 | |
| 192 | S | C | -0.6038 | |
| 193 | L | C | -0.7499 | |
| 194 | G | C | -0.9445 | |
| 195 | T | C | -0.6706 | |
| 196 | Q | C | -1.1295 | |
| 197 | T | C | -1.0349 | |
| 198 | Y | C | 0.0000 | |
| 199 | I | C | -1.0758 | |
| 200 | C | C | 0.0000 | |
| 201 | N | C | -1.4198 | |
| 202 | V | C | 0.0000 | |
| 203 | N | C | -2.3572 | |
| 204 | H | C | 0.0000 | |
| 205 | K | C | -2.9188 | |
| 206 | P | C | -1.6932 | |
| 207 | S | C | -1.9870 | |
| 208 | N | C | -2.5479 | |
| 209 | T | C | -2.2289 | |
| 210 | K | C | -2.7920 | |
| 211 | V | C | -1.3904 | |
| 212 | D | C | -2.1643 | |
| 213 | K | C | -1.6478 | |
| 214 | K | C | -2.2672 | |
| 215 | V | C | 0.0000 | |
| 216 | E | C | -2.8328 | |
| 217 | P | C | -2.0039 | |
| 218 | K | C | -2.1986 | |
| 219 | S | C | -1.0828 | |
| 220 | C | C | 0.1584 |