Chain sequence(s) |
H: QVQLVQSGAEVKKPGSSVKVSCKASGYSITDDLIHWVRQAPGQGLEWMGWIDPEDGETNYAQKFQGRVTLTADTSTSTAYMELSSLRSEDTAVYYCARSLDSTWIYPFAYWGQGTLVTVSS
L: DIVMTQSPDSLAVSLGERATINCKSSQSLLRRGNQKNHLAWYQQKPGQPPKLLIYDASTGQSGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCLQSYITPPTFGAGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:23) [INFO] Main: Simulation completed successfully. (00:03:25) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.4661 | |
2 | V | H | -0.8427 | |
3 | Q | H | -1.1496 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.4848 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.3762 | |
8 | G | H | -0.4921 | |
9 | A | H | 0.1218 | |
11 | E | H | 0.0336 | |
12 | V | H | 0.9470 | |
13 | K | H | -0.9739 | |
14 | K | H | -2.2434 | |
15 | P | H | -2.3948 | |
16 | G | H | -1.7099 | |
17 | S | H | -1.3644 | |
18 | S | H | -1.2596 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.3088 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.2851 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.6281 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.7775 | |
27 | G | H | -1.0749 | |
28 | Y | H | -0.7596 | |
29 | S | H | -0.6534 | |
30 | I | H | 0.0000 | |
35 | T | H | -1.8602 | |
36 | D | H | -1.9977 | |
37 | D | H | 0.0000 | |
38 | L | H | 0.0000 | |
39 | I | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.5459 | |
45 | A | H | -0.9325 | |
46 | P | H | -0.9438 | |
47 | G | H | -1.2113 | |
48 | Q | H | -1.6502 | |
49 | G | H | -0.9055 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.7775 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | W | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | D | H | -2.1746 | |
58 | P | H | 0.0000 | |
59 | E | H | -3.4093 | |
62 | D | H | -3.3544 | |
63 | G | H | -2.5901 | |
64 | E | H | -2.5056 | |
65 | T | H | -1.1852 | |
66 | N | H | -0.9089 | |
67 | Y | H | -1.1134 | |
68 | A | H | 0.0000 | |
69 | Q | H | -2.7435 | |
70 | K | H | -2.7429 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.4649 | |
74 | G | H | -1.6465 | |
75 | R | H | -1.5108 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.6422 | |
78 | L | H | 0.0000 | |
79 | T | H | -0.5045 | |
80 | A | H | -0.6890 | |
81 | D | H | -0.9202 | |
82 | T | H | -0.9040 | |
83 | S | H | -0.4779 | |
84 | T | H | -0.5228 | |
85 | S | H | -0.6082 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.2828 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.0157 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.0846 | |
93 | S | H | -1.3433 | |
94 | L | H | 0.0000 | |
95 | R | H | -3.1930 | |
96 | S | H | -2.3986 | |
97 | E | H | -2.5432 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.7785 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.4341 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.1985 | |
107 | S | H | 0.0000 | |
108 | L | H | -0.0786 | |
109 | D | H | -1.0877 | |
110 | S | H | -0.8422 | |
111 | T | H | -0.1722 | |
112A | W | H | 0.7114 | |
112 | I | H | 0.8963 | |
113 | Y | H | 0.4054 | |
114 | P | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | A | H | 0.0687 | |
117 | Y | H | 0.2663 | |
118 | W | H | -0.1110 | |
119 | G | H | 0.0000 | |
120 | Q | H | -0.9801 | |
121 | G | H | -0.3621 | |
122 | T | H | 0.0000 | |
123 | L | H | 0.5516 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.2149 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.9852 | |
128 | S | H | -1.0440 | |
1 | D | L | -1.3943 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.8813 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.4125 | |
6 | Q | L | 0.0000 | |
7 | S | L | -1.1826 | |
8 | P | L | -1.2691 | |
9 | D | L | -2.1362 | |
10 | S | L | -1.4511 | |
11 | L | L | -0.7887 | |
12 | A | L | -0.4358 | |
13 | V | L | -1.0170 | |
14 | S | L | -0.9953 | |
15 | L | L | -0.0731 | |
16 | G | L | -1.2153 | |
17 | E | L | -2.7114 | |
18 | R | L | -2.7735 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.5922 | |
21 | I | L | 0.0000 | |
22 | N | L | -1.2127 | |
23 | C | L | 0.0000 | |
24 | K | L | -1.6664 | |
25 | S | L | 0.0000 | |
26 | S | L | -0.8113 | |
27 | Q | L | -1.3032 | |
28 | S | L | -1.1879 | |
29 | L | L | 0.0000 | |
30 | L | L | -1.4877 | |
31 | R | L | -2.0755 | |
32 | R | L | -3.0360 | |
33 | G | L | -2.2489 | |
34 | N | L | -2.3530 | |
35 | Q | L | -2.7512 | |
36 | K | L | -1.8947 | |
37 | N | L | 0.0000 | |
38 | H | L | 0.0000 | |
39 | L | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.1144 | |
46 | P | L | -0.8316 | |
47 | G | L | -1.2581 | |
48 | Q | L | -1.6937 | |
49 | P | L | -1.0869 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.0557 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.0926 | |
56 | D | L | -0.4877 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.6194 | |
66 | T | L | -0.4694 | |
67 | G | L | -1.0156 | |
68 | Q | L | -0.6679 | |
69 | S | L | -0.6023 | |
70 | G | L | -0.8330 | |
71 | V | L | -0.8746 | |
72 | P | L | -1.2126 | |
74 | D | L | -2.0984 | |
75 | R | L | -1.5421 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.8349 | |
78 | G | L | -0.5044 | |
79 | S | L | -0.7275 | |
80 | G | L | -1.0353 | |
83 | S | L | -1.0519 | |
84 | G | L | -1.1221 | |
85 | T | L | -1.3917 | |
86 | D | L | -1.9666 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.8194 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.6479 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.7567 | |
93 | S | L | -1.8434 | |
94 | L | L | 0.0000 | |
95 | Q | L | -1.4092 | |
96 | A | L | -0.6381 | |
97 | E | L | -1.4825 | |
98 | D | L | 0.0000 | |
99 | V | L | -0.3529 | |
100 | A | L | 0.0000 | |
101 | V | L | -0.4575 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | L | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | S | L | 0.7667 | |
108 | Y | L | 0.7106 | |
109 | I | L | 1.0659 | |
114 | T | L | 0.2043 | |
115 | P | L | -0.3486 | |
116 | P | L | 0.0000 | |
117 | T | L | 0.2681 | |
118 | F | L | 0.3374 | |
119 | G | L | 0.0000 | |
120 | A | L | -0.4571 | |
121 | G | L | -0.7995 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.3699 | |
124 | V | L | 0.0000 | |
125 | E | L | -0.7860 | |
126 | I | L | -0.2449 | |
127 | K | L | -1.3195 |