| Chain sequence(s) |
A: RADARADARADARADA
C: RADARADARADARADA B: RADARADARADARADA E: RADARADARADARADA D: RADARADARADARADA G: RADARADARADARADA F: RADARADARADARADA I: RADARADARADARADA H: RADARADARADARADA K: RADARADARADARADA J: RADARADARADARADA M: RADARADARADARADA L: RADARADARADARADA O: RADARADARADARADA N: RADARADARADARADA Q: RADARADARADARADA P: RADARADARADARADA S: RADARADARADARADA R: RADARADARADARADA T: RADARADARADARADA input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:13:20)
[INFO] Main: Simulation completed successfully. (00:13:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.2863 | |
| 2 | A | A | -1.0663 | |
| 3 | D | A | 0.0000 | |
| 4 | A | A | -0.3033 | |
| 5 | R | A | -0.6413 | |
| 6 | A | A | -0.3366 | |
| 7 | D | A | 0.0000 | |
| 8 | A | A | -0.2964 | |
| 9 | R | A | -0.5916 | |
| 10 | A | A | -0.3141 | |
| 11 | D | A | 0.0000 | |
| 12 | A | A | -0.5515 | |
| 13 | R | A | -1.5486 | |
| 14 | A | A | -1.2519 | |
| 15 | D | A | -1.6363 | |
| 16 | A | A | -0.9192 | |
| 1 | R | B | -2.6206 | |
| 2 | A | B | -1.3393 | |
| 3 | D | B | 0.0000 | |
| 4 | A | B | -0.5024 | |
| 5 | R | B | -0.7567 | |
| 6 | A | B | -0.3287 | |
| 7 | D | B | 0.0000 | |
| 8 | A | B | -0.2694 | |
| 9 | R | B | -0.6898 | |
| 10 | A | B | -0.2833 | |
| 11 | D | B | 0.0000 | |
| 12 | A | B | -0.2227 | |
| 13 | R | B | -1.0666 | |
| 14 | A | B | -1.0108 | |
| 15 | D | B | -1.5638 | |
| 16 | A | B | -0.8543 | |
| 1 | R | C | -2.1927 | |
| 2 | A | C | -0.9861 | |
| 3 | D | C | 0.0000 | |
| 4 | A | C | -0.3469 | |
| 5 | R | C | -0.7683 | |
| 6 | A | C | -0.3643 | |
| 7 | D | C | 0.0000 | |
| 8 | A | C | -0.3069 | |
| 9 | R | C | -0.7207 | |
| 10 | A | C | -0.3651 | |
| 11 | D | C | 0.0000 | |
| 12 | A | C | -0.5160 | |
| 13 | R | C | -1.6473 | |
| 14 | A | C | -1.4299 | |
| 15 | D | C | -1.9226 | |
| 16 | A | C | -1.0710 | |
| 1 | R | D | -2.6222 | |
| 2 | A | D | -1.3362 | |
| 3 | D | D | -1.1237 | |
| 4 | A | D | -0.5008 | |
| 5 | R | D | -0.7820 | |
| 6 | A | D | -0.3743 | |
| 7 | D | D | 0.0000 | |
| 8 | A | D | -0.3409 | |
| 9 | R | D | -0.8216 | |
| 10 | A | D | -0.5128 | |
| 11 | D | D | -0.7467 | |
| 12 | A | D | -0.4868 | |
| 13 | R | D | -1.3386 | |
| 14 | A | D | -1.1279 | |
| 15 | D | D | -1.5795 | |
| 16 | A | D | -0.8976 | |
| 1 | R | E | -2.4932 | |
| 2 | A | E | -1.2321 | |
| 3 | D | E | -1.1087 | |
| 4 | A | E | -0.6525 | |
| 5 | R | E | -1.0910 | |
| 6 | A | E | -0.5349 | |
| 7 | D | E | 0.0000 | |
| 8 | A | E | -0.3490 | |
| 9 | R | E | -0.7663 | |
| 10 | A | E | -0.3627 | |
| 11 | D | E | 0.0000 | |
| 12 | A | E | -0.3978 | |
| 13 | R | E | -1.3496 | |
| 14 | A | E | -1.1825 | |
| 15 | D | E | -1.6625 | |
| 16 | A | E | -0.9380 | |
| 1 | R | F | -2.2446 | |
| 2 | A | F | -1.0422 | |
| 3 | D | F | 0.0000 | |
| 4 | A | F | -0.3494 | |
| 5 | R | F | -0.6463 | |
| 6 | A | F | -0.2950 | |
| 7 | D | F | 0.0000 | |
| 8 | A | F | -0.2283 | |
| 9 | R | F | -0.7033 | |
| 10 | A | F | -0.4816 | |
| 11 | D | F | -0.7623 | |
| 12 | A | F | -0.5408 | |
| 13 | R | F | -1.4379 | |
| 14 | A | F | -1.2164 | |
| 15 | D | F | -1.6829 | |
| 16 | A | F | -0.9457 | |
| 1 | R | G | -2.4433 | |
| 2 | A | G | -1.1538 | |
| 3 | D | G | 0.0000 | |
| 4 | A | G | -0.4554 | |
| 5 | R | G | -0.8955 | |
| 6 | A | G | -0.4158 | |
| 7 | D | G | 0.0000 | |
| 8 | A | G | -0.1419 | |
| 9 | R | G | -0.4758 | |
| 10 | A | G | -0.2204 | |
| 11 | D | G | 0.0000 | |
| 12 | A | G | -0.3013 | |
| 13 | R | G | -1.0964 | |
| 14 | A | G | -1.0086 | |
| 15 | D | G | -1.4203 | |
| 16 | A | G | -0.7832 | |
| 1 | R | H | -1.8290 | |
| 2 | A | H | -0.7913 | |
| 3 | D | H | 0.0000 | |
| 4 | A | H | -0.2885 | |
| 5 | R | H | -0.5890 | |
| 6 | A | H | -0.2846 | |
| 7 | D | H | 0.0000 | |
| 8 | A | H | -0.2413 | |
| 9 | R | H | -0.6667 | |
| 10 | A | H | -0.3819 | |
| 11 | D | H | -0.5824 | |
| 12 | A | H | -0.4127 | |
| 13 | R | H | -1.2589 | |
| 14 | A | H | -1.0502 | |
| 15 | D | H | -1.4471 | |
| 16 | A | H | -0.8233 | |
| 1 | R | I | -1.9561 | |
| 2 | A | I | -0.8571 | |
| 3 | D | I | 0.0000 | |
| 4 | A | I | -0.3106 | |
| 5 | R | I | -0.6704 | |
| 6 | A | I | -0.3386 | |
| 7 | D | I | 0.0000 | |
| 8 | A | I | -0.4072 | |
| 9 | R | I | -0.8626 | |
| 10 | A | I | -0.4023 | |
| 11 | D | I | 0.0000 | |
| 12 | A | I | -0.2512 | |
| 13 | R | I | -1.0696 | |
| 14 | A | I | -1.0454 | |
| 15 | D | I | -1.4743 | |
| 16 | A | I | -0.8697 | |
| 1 | R | J | -2.4233 | |
| 2 | A | J | -1.1951 | |
| 3 | D | J | 0.0000 | |
| 4 | A | J | -0.2062 | |
| 5 | R | J | -0.5945 | |
| 6 | A | J | -0.3942 | |
| 7 | D | J | -0.6344 | |
| 8 | A | J | -0.4340 | |
| 9 | R | J | -0.8043 | |
| 10 | A | J | -0.3769 | |
| 11 | D | J | 0.0000 | |
| 12 | A | J | -0.3578 | |
| 13 | R | J | -1.1971 | |
| 14 | A | J | -0.9625 | |
| 15 | D | J | 0.0000 | |
| 16 | A | J | -0.7446 | |
| 1 | R | K | -2.3269 | |
| 2 | A | K | -1.1424 | |
| 3 | D | K | -1.0500 | |
| 4 | A | K | -0.5726 | |
| 5 | R | K | -1.0204 | |
| 6 | A | K | -0.5135 | |
| 7 | D | K | 0.0000 | |
| 8 | A | K | -0.3307 | |
| 9 | R | K | -0.8140 | |
| 10 | A | K | -0.4133 | |
| 11 | D | K | 0.0000 | |
| 12 | A | K | -0.3016 | |
| 13 | R | K | -1.1223 | |
| 14 | A | K | -1.1974 | |
| 15 | D | K | -1.6848 | |
| 16 | A | K | -0.9978 | |
| 1 | R | L | -2.4858 | |
| 2 | A | L | -1.3137 | |
| 3 | D | L | 0.0000 | |
| 4 | A | L | -0.4648 | |
| 5 | R | L | -0.9116 | |
| 6 | A | L | -0.4512 | |
| 7 | D | L | 0.0000 | |
| 8 | A | L | -0.2631 | |
| 9 | R | L | -0.8030 | |
| 10 | A | L | -0.5619 | |
| 11 | D | L | -0.9258 | |
| 12 | A | L | -0.6883 | |
| 13 | R | L | -1.5970 | |
| 14 | A | L | -1.1988 | |
| 15 | D | L | 0.0000 | |
| 16 | A | L | -0.8717 | |
| 1 | R | M | -2.5035 | |
| 2 | A | M | -1.3143 | |
| 3 | D | M | -1.3377 | |
| 4 | A | M | -0.8455 | |
| 5 | R | M | -1.4709 | |
| 6 | A | M | -0.7620 | |
| 7 | D | M | 0.0000 | |
| 8 | A | M | -0.3672 | |
| 9 | R | M | -0.8019 | |
| 10 | A | M | -0.4477 | |
| 11 | D | M | 0.0000 | |
| 12 | A | M | -0.6518 | |
| 13 | R | M | -1.6523 | |
| 14 | A | M | -1.3139 | |
| 15 | D | M | 0.0000 | |
| 16 | A | M | -0.9316 | |
| 1 | R | N | -2.5944 | |
| 2 | A | N | -1.5722 | |
| 3 | D | N | -1.2435 | |
| 4 | A | N | -0.6392 | |
| 5 | R | N | -0.9336 | |
| 6 | A | N | -0.4860 | |
| 7 | D | N | 0.0000 | |
| 8 | A | N | -0.6008 | |
| 9 | R | N | -1.3688 | |
| 10 | A | N | -0.8929 | |
| 11 | D | N | -1.1945 | |
| 12 | A | N | -0.8568 | |
| 13 | R | N | -1.8099 | |
| 14 | A | N | -1.3598 | |
| 15 | D | N | -1.7185 | |
| 16 | A | N | -0.9534 | |
| 1 | R | O | -2.3271 | |
| 2 | A | O | -1.1464 | |
| 3 | D | O | 0.0000 | |
| 4 | A | O | -0.5896 | |
| 5 | R | O | -1.3261 | |
| 6 | A | O | -0.8205 | |
| 7 | D | O | -1.0980 | |
| 8 | A | O | -0.7759 | |
| 9 | R | O | -1.2486 | |
| 10 | A | O | -0.5384 | |
| 11 | D | O | 0.0000 | |
| 12 | A | O | -0.4585 | |
| 13 | R | O | -1.5749 | |
| 14 | A | O | -1.2862 | |
| 15 | D | O | -1.7357 | |
| 16 | A | O | -0.9178 | |
| 1 | R | P | -2.0771 | |
| 2 | A | P | -0.9910 | |
| 3 | D | P | 0.0000 | |
| 4 | A | P | -0.3475 | |
| 5 | R | P | -0.6599 | |
| 6 | A | P | -0.4566 | |
| 7 | D | P | -0.7788 | |
| 8 | A | P | -0.6414 | |
| 9 | R | P | -1.1424 | |
| 10 | A | P | -0.5928 | |
| 11 | D | P | 0.0000 | |
| 12 | A | P | -0.3378 | |
| 13 | R | P | -1.0714 | |
| 14 | A | P | -0.8881 | |
| 15 | D | P | -1.3056 | |
| 16 | A | P | -0.7581 | |
| 1 | R | Q | -1.7091 | |
| 2 | A | Q | -0.7059 | |
| 3 | D | Q | 0.0000 | |
| 4 | A | Q | -0.1779 | |
| 5 | R | Q | -0.5629 | |
| 6 | A | Q | -0.2774 | |
| 7 | D | Q | 0.0000 | |
| 8 | A | Q | -0.3269 | |
| 9 | R | Q | -0.7250 | |
| 10 | A | Q | -0.2669 | |
| 11 | D | Q | 0.0000 | |
| 12 | A | Q | -0.1806 | |
| 13 | R | Q | -1.0389 | |
| 14 | A | Q | -0.9695 | |
| 15 | D | Q | -1.4724 | |
| 16 | A | Q | -0.8379 | |
| 1 | R | R | -2.2712 | |
| 2 | A | R | -1.0041 | |
| 3 | D | R | 0.0000 | |
| 4 | A | R | -0.1662 | |
| 5 | R | R | -0.4471 | |
| 6 | A | R | -0.1964 | |
| 7 | D | R | 0.0000 | |
| 8 | A | R | -0.1467 | |
| 9 | R | R | -0.4727 | |
| 10 | A | R | -0.1971 | |
| 11 | D | R | 0.0000 | |
| 12 | A | R | -0.1692 | |
| 13 | R | R | -0.9477 | |
| 14 | A | R | -0.8678 | |
| 15 | D | R | -1.3694 | |
| 16 | A | R | -0.7578 | |
| 1 | R | S | -2.1533 | |
| 2 | A | S | -0.9808 | |
| 3 | D | S | 0.0000 | |
| 4 | A | S | -0.3864 | |
| 5 | R | S | -0.7121 | |
| 6 | A | S | -0.2728 | |
| 7 | D | S | 0.0000 | |
| 8 | A | S | -0.2698 | |
| 9 | R | S | -0.7023 | |
| 10 | A | S | -0.3248 | |
| 11 | D | S | 0.0000 | |
| 12 | A | S | -0.3471 | |
| 13 | R | S | -1.3126 | |
| 14 | A | S | -1.2780 | |
| 15 | D | S | -1.8551 | |
| 16 | A | S | -1.0549 | |
| 1 | R | T | -2.4626 | |
| 2 | A | T | -1.1936 | |
| 3 | D | T | 0.0000 | |
| 4 | A | T | -0.2473 | |
| 5 | R | T | -0.5497 | |
| 6 | A | T | -0.2284 | |
| 7 | D | T | 0.0000 | |
| 8 | A | T | -0.1612 | |
| 9 | R | T | -0.4464 | |
| 10 | A | T | -0.2127 | |
| 11 | D | T | 0.0000 | |
| 12 | A | T | -0.1708 | |
| 13 | R | T | -0.9697 | |
| 14 | A | T | -0.9165 | |
| 15 | D | T | -1.4455 | |
| 16 | A | T | -0.8434 |