| Chain sequence(s) |
A: IVIVKGHE
C: IVIVKGHE B: IVIVKGHE D: IVIVKGHE input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 4.9914 | |
| 2 | V | A | 4.8609 | |
| 3 | I | A | 3.3793 | |
| 4 | V | A | 1.4612 | |
| 5 | K | A | -1.3686 | |
| 6 | G | A | -2.8760 | |
| 7 | H | A | -3.9818 | |
| 8 | E | A | -3.9452 | |
| 1 | I | B | 5.0018 | |
| 2 | V | B | 4.9264 | |
| 3 | I | B | 3.3930 | |
| 4 | V | B | 1.4169 | |
| 5 | K | B | -1.4278 | |
| 6 | G | B | -2.7615 | |
| 7 | H | B | -3.7450 | |
| 8 | E | B | -3.8988 | |
| 1 | I | C | 4.3094 | |
| 2 | V | C | 4.6178 | |
| 3 | I | C | 3.4722 | |
| 4 | V | C | 1.7519 | |
| 5 | K | C | -1.3691 | |
| 6 | G | C | -2.3264 | |
| 7 | H | C | -3.2966 | |
| 8 | E | C | -3.1890 | |
| 1 | I | D | 4.2459 | |
| 2 | V | D | 4.6488 | |
| 3 | I | D | 3.2750 | |
| 4 | V | D | 1.8575 | |
| 5 | K | D | -1.3895 | |
| 6 | G | D | -2.6199 | |
| 7 | H | D | -3.3426 | |
| 8 | E | D | -3.2540 |